KEGG   Mus musculus (house mouse): 24128
Entry
24128             CDS       T01002                                 
Symbol
Xrn2
Name
(RefSeq) 5'-3' exoribonuclease 2
  KO
K12619  5'-3' exoribonuclease 2 [EC:3.1.13.-]
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu03008  Ribosome biogenesis in eukaryotes
mmu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    24128 (Xrn2)
  09123 Folding, sorting and degradation
   03018 RNA degradation
    24128 (Xrn2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mmu03021]
    24128 (Xrn2)
   03019 Messenger RNA biogenesis [BR:mmu03019]
    24128 (Xrn2)
   03009 Ribosome biogenesis [BR:mmu03009]
    24128 (Xrn2)
   03016 Transfer RNA biogenesis [BR:mmu03016]
    24128 (Xrn2)
Transcription machinery [BR:mmu03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     24128 (Xrn2)
Messenger RNA biogenesis [BR:mmu03019]
 Eukaryotic type
  mRNA degradation factors
   5'-3' decay
    5' exonucleases
     24128 (Xrn2)
Ribosome biogenesis [BR:mmu03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    24128 (Xrn2)
Transfer RNA biogenesis [BR:mmu03016]
 Eukaryotic type
  tRNA degradation factors
   Rapid tRNA decay (RTD) pathway factors
    24128 (Xrn2)
SSDB
Motif
Pfam: XRN_M XRN_N
Other DBs
NCBI-GeneID: 24128
NCBI-ProteinID: NP_036047
MGI: 894687
Ensembl: ENSMUSG00000027433
UniProt: Q9DBR1
Position
2:146854672..146919922
AA seq 951 aa
MGVPAFFRWLSRKYPSIIVNCVEEKPKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIH
PCTHPEDKPAPKNEDEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR
ASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIAD
RLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLG
LATHEPNFTIIREEFKPNKPKPCALCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEGE
FIFLRLNVLREYLERELTMASLPFPFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREGAI
DRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRRRQKE
KRKRMKRDQPAFTPSGILTPHALGSRNSPGCQVASNPRQAAYEMRMQRNSSPSISPNTSF
ASDGSPSPLGGIKRKAEDSDSEPEPEDNVRLWEAGWKQRYYKNKFDVDAADEKFRRKVVQ
SYVEGLCWVLRYYYQGCASWKWYYPFHYAPFASDFEGIADMSSEFEKGTKPFKPLEQLMG
VFPAASGNFLPPTWRKLMSDPDSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRA
ALEEVYPDLTPEENRRNSLGGDVLFVGKLHPLRDFILELYQTGSTEPVDVPPELCHGIQG
TFSLDEEAILPDQTVCSPVPMLRDLTQNTAVSINFKDPQFAEDYVFKAAMLPGARKPATV
LKPGDWEKSSNGRQWKPQLGFNRDRRPVHLDQAAFRTLGHVTPRGSGTSVYTNTALPPAN
YQGNNYRPLLRGQAQIPKLMSNMRPQDSWRGPPPLFQQHRFERSVGAEPLLPWNRMIQNQ
NAAFQPNQYQMLGGPGGYPPRRDDHRGGRQGYPREGRKYPLPPPSGRYSWN
NT seq 2856 nt   +upstreamnt  +downstreamnt
atgggagtcccggcgttcttccgctggctcagccgcaagtacccgtccatcattgtcaac
tgcgtggaggagaagccaaaagaatgcaacggtgtaaagattccagttgatgccagtaaa
cctaatccaaatgatgtggagtttgataatctgtatttggatatgaatgggatcatccac
ccctgcactcatcctgaagacaaaccagcaccaaaaaatgaagatgaaatgatggttgca
atttttgagtacattgacagacttttcaatattgtaagaccaagaagacttctctacatg
gcaatagatggggtggcaccacgtgcaaaaatgaatcagcagcgttcaaggaggttcaga
gcatcaaaggaaggaatggaagcagcagttgagaagcagcgagtcagagaggaaatactt
gcaaaaggtggctttcttcctccagaagaaataaaagaaagatttgacagcaactgtatt
accccaggaactgagttcatggacaatcttgctaaatgccttcgctattacatagctgat
cgtttaaataatgaccctgggtggaaaaatttgacagttatattatctgatgctagtgca
cctggtgaaggagaacacaaaatcatggattacattagaagacaaagagcccagcctaac
catgacccaaatactcatcattgtttgtgtggagctgatgctgatctaattatgcttggt
cttgctacacatgaacctaacttcaccataatcagagaagaattcaaaccaaataaacct
aaaccatgtgctctttgtaatcagtttggacacgaggtcaaggattgtgaaggtttgcca
agagaaaagaagggaaagcatgatgaacttgcagatagtcttccttgtgcagaaggggag
tttatcttccttcggctgaatgtccttcgagagtatctggaaagagaactcaccatggcc
agcttaccattcccatttgatgtggagaggagcattgatgactgggtgttcatgtgcttc
tttgtggggaatgatttccttcctcacttgccatcactagagattagggaaggtgcaatt
gatcgtttggttaacatatacaaaaacgtggtacacaaaactgggggttaccttacagaa
agtggttatgtcaatctgcaaagagtacagatgatcatgttagcagttggtgaagttgag
gatagcatttttaaaaagagaaaagatgatgaggacagttttagaagacgacagaaagaa
aaaagaaagaggatgaagagagatcaaccagcttttactcctagtggaatattaacacct
catgccttgggttcaagaaattcaccaggttgtcaagtagccagtaatccaagacaagca
gcctatgaaatgaggatgcagagaaactctagtccttcaatatctcctaatacaagtttt
gcatctgatggctccccatctccactaggaggaattaagagaaaagcagaagacagtgac
agtgagccagagccagaggataacgtcaggttatgggaagctggttggaagcaacgatac
tacaagaacaaatttgatgtagatgcagctgatgagaaattccgacgtaaggttgttcag
tcctacgttgaaggactgtgctgggttcttcgctattattaccagggctgtgcttcctgg
aagtggtattatccattccattatgcaccatttgcctcagactttgaaggtattgcagac
atgtcctctgaatttgaaaagggcacaaaaccgtttaagccactggaacaactaatgggg
gttttcccagctgcaagtggtaactttctacctccaacatggcggaagctcatgagtgac
cctgattccagtataattgacttctatcctgaagattttgctattgatttgaatgggaag
aaatatgcatggcaaggtgttgctctattgccatttgtggatgagcgaaggctgcgagcg
gctctagaagaggtgtacccagacctcactccagaagagaacaggagaaatagtcttgga
ggtgatgttttgtttgtgggaaaacttcatccactacgcgacttcattttagagctgtat
cagacgggttccacagagccagttgatgtgccacctgaattgtgtcacgggattcaaggg
acgttttctttggatgaagaagccattcttccagaccaaacagtatgttcccctgtgccc
atgttgcgggacctgacacagaacactgcagtcagtattaattttaaagatccacagttt
gctgaagattatgtttttaaagctgcaatgcttccaggagcaagaaagccagcaacagtt
ctgaaacctggtgactgggaaaaatccagcaatgggcggcaatggaaacctcagcttggc
tttaaccgggaccggcggcctgttcacctggaccaggcagcctttagaactttaggccat
gttacaccaagaggctcggggacgagtgtttatacgaacactgcactaccacctgccaat
taccaggggaacaattacaggccactgctgagaggtcaagctcagatcccaaaacttatg
tcaaatatgaggccccaagattcctggcgaggccctcctcctcttttccagcagcataga
tttgagagaagtgttggagctgaacctctactgccatggaaccggatgatccaaaaccaa
aatgcagcctttcagccaaatcagtaccagatgctaggaggacctggaggctatccaccc
agacgtgacgatcaccgaggagggagacagggatatcccagagaaggacggaaataccct
ttgccaccaccctcgggaagatacagttggaattag

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (28)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (19)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (3)   
   OC (1)   
Protein sequence (7)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (5)   
DNA sequence (31)   
   RefSeq(nuc) (5)   
   GenBank (13)   
   EMBL (13)   
Protein domain (2)   
   Pfam (2)   
All databases (76)   

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