KEGG   Mus musculus (house mouse): 243616
Entry
243616            CDS       T01002                                 
Symbol
Slc6a11, D930045G19Rik, E130202I16Rik, GAT4, Gabt4, Gat3
Name
(RefSeq) solute carrier family 6 (neurotransmitter transporter, GABA), member 11
  KO
K05044  solute carrier family 6 (neurotransmitter transporter, GABA) member 11
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu04721  Synaptic vesicle cycle
mmu04727  GABAergic synapse
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09150 Organismal Systems
  09156 Nervous system
   04727 GABAergic synapse
    243616 (Slc6a11)
   04721 Synaptic vesicle cycle
    243616 (Slc6a11)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:mmu02000]
    243616 (Slc6a11)
Transporters [BR:mmu02000]
 Solute carrier family (SLC)
  SLC6: Sodium- and chloride-dependent neurotransmitter transporter
   243616 (Slc6a11)
SSDB
Motif
Pfam: SNF
Other DBs
NCBI-GeneID: 243616
NCBI-ProteinID: NP_766478
MGI: 95630
Ensembl: ENSMUSG00000030307
UniProt: P31650
Position
6:114108202..114226847
AA seq 627 aa
MTAEQALPLGNGKAAEEARGSETLGGGGGGAAGTREARDKAVHERGHWNNKVEFVLSVAG
EIIGLGNVWRFPYLCYKNGGGAFLIPYVVFFICCGIPVFFLETALGQFTSEGGITCWRRV
CPLFEGIGYATQVIEAHLNVYYIIILAWAIFYLSNCFTTELPWATCGHEWNTEKCVEFQK
LNFSNYSHVSLQNATSPVMEFWERRVLAISDGIEHIGNLRWELALCLLAAWTICYFCIWK
GTKSTGKVVYVTATFPYIMLLILLIRGVTLPGASEGIKFYLYPDLSRLSDPQVWVDAGTQ
IFFSYAICLGCLTALGSYNNYNNNCYRDCIMLCCLNSGTSFVAGFAIFSVLGFMAYEQGV
PIAEVAESGPGLAFIAYPKAVTMMPLSPLWATLFFMMLIFLGLDSQFVCVESLVTAVVDM
YPKVFRRGYRRELLILALSIISYFLGLVMLTEGGMYIFQLFDSYAASGMCLLFVAIFECV
CIGWVYGSNRFYDNIEDMIGYRPLSLIKWCWKVVTPGICAGIFIFFLVKYKPLKYNNVYT
YPAWGYGIGWLMALSSMLCIPLWIFIKLWKTEGTLPEKLQKLTVPSADLKMRGKLGASPR
TVTVNDCEAKVKGDGTISAITEKETHF
NT seq 1884 nt   +upstreamnt  +downstreamnt
atgactgcggagcaagcgctgcccctgggcaacgggaaagcggccgaggaggcgcggggg
tccgagacgctgggcggcggcggcgggggcgcggcggggacgcgcgaggcgcgcgacaag
gctgtccacgagcgcggccactggaacaacaaggtggagttcgtgttgagcgtagctgga
gagatcatcggactgggcaacgtgtggcgctttccctacctgtgctacaaaaacggcgga
ggggcattcctgattccttacgtggtgtttttcatctgctgcggaatccccgtcttcttc
ctggaaacggctctggggcagttcacgagcgagggtggcatcacgtgctggaggagggtc
tgccctttatttgaaggcattggctatgcaacacaggtgatcgaggcacacctcaatgtc
tactacatcatcatcctggcgtgggccatcttctacctaagcaattgcttcaccaccgag
ctcccctgggccacctgtgggcacgagtggaacacagagaaatgtgtggagttccagaag
ctgaacttcagcaactacagtcatgtgtccctgcagaatgccacctccccggtcatggag
ttctgggaacgccgggtcttggctatatccgatggcattgagcacattgggaacctccgt
tgggaactggcattatgtctcctggcggcctggaccatctgctacttctgcatatggaag
ggtactaagtcgactggaaaggtcgtgtatgtcactgcaaccttcccctacatcatgctg
ctgatcctcctgatccgaggggtcacgttgccaggcgcctctgaaggcatcaagttctat
ctgtaccctgacctctcccggctctctgacccacaggtgtgggtggacgctgggacgcag
atctttttctcctatgccatctgcctgggctgcctaaccgctctggggagttacaacaac
tataacaacaactgctacagggactgcattatgctctgctgtctaaacagtggcaccagc
ttcgtggctgggtttgccatcttctcagtcctgggcttcatggcatacgagcagggtgtg
cctattgccgaggtggcagagtcaggtcctggactggctttcatcgcctaccccaaggct
gtcactatgatgcccctctctccactgtgggccaccttgttcttcatgatgctcatcttc
ctgggcctggacagtcagtttgtgtgcgtggagagtcttgtgacagccgtggtagacatg
taccctaaggtcttccggcggggctaccggcgagaactgctcatcctggccctgtccatc
atctcctatttcctaggcctggtgatgctgaccgagggaggcatgtacatcttccagctt
tttgactcatacgccgccagtggcatgtgcttgctctttgtggccatctttgagtgtgtc
tgcatcggctgggtatatggaagcaaccggttctatgacaatattgaggatatgattggt
taccggccactgtcactcatcaagtggtgctggaaagtcgtgacccctgggatctgtgcg
ggcatcttcatcttctttctggtcaagtacaaaccgctcaagtacaacaatgtgtacaca
tatcctgcttggggctacggcatcggctggctcatggctctgtcctccatgctgtgtatc
ccactctggatcttcattaagctgtggaagacagagggcacactgcccgagaaattacag
aagttgacagtccccagcgccgatctgaaaatgcggggcaagcttggggccagcccacgg
acggtgaccgttaatgactgtgaggccaaggtcaagggcgacggcaccatctctgccatc
acagagaaggagacacacttctga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (9)   
   RefSeq(nuc) (1)   
   GenBank (4)   
   EMBL (4)   
Protein domain (1)   
   Pfam (1)   
All databases (31)   

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