KEGG   Mus musculus (house mouse): 245610
Entry
245610            CDS       T01002                                 
Symbol
Nxf3, Gm384
Name
(RefSeq) nuclear RNA export factor 3
  KO
K14284  nuclear RNA export factor
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu03008  Ribosome biogenesis in eukaryotes
mmu03013  Nucleocytoplasmic transport
mmu03015  mRNA surveillance pathway
mmu05014  Amyotrophic lateral sclerosis
mmu05164  Influenza A
mmu05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    245610 (Nxf3)
   03015 mRNA surveillance pathway
    245610 (Nxf3)
   03008 Ribosome biogenesis in eukaryotes
    245610 (Nxf3)
 09160 Human Diseases
  09172 Infectious disease: viral
   05164 Influenza A
    245610 (Nxf3)
   05168 Herpes simplex virus 1 infection
    245610 (Nxf3)
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    245610 (Nxf3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mmu03019]
    245610 (Nxf3)
   03009 Ribosome biogenesis [BR:mmu03009]
    245610 (Nxf3)
Messenger RNA biogenesis [BR:mmu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     245610 (Nxf3)
   mRNA cycle factors
    Stress granule specific factors
     245610 (Nxf3)
Ribosome biogenesis [BR:mmu03009]
 Eukaryotic type
  Pre-60S particles
   Export and cytoplasmic maturation factors
    245610 (Nxf3)
SSDB
Motif
Pfam: Tap-RNA_bind TAP_C NTF2
Other DBs
NCBI-GeneID: 245610
NCBI-ProteinID: NP_001019312
MGI: 2685230
Ensembl: ENSMUSG00000057000
UniProt: Q4ZGD9
Position
X:complement(134972272..135040382)
AA seq 553 aa
MGRSSETNPLRRRMRCRRIFQQRFLNSPAHVSDTVHTSFYQQPAMSNPPMHTRRYTPYGI
PSRYQRVSVQKWNQTDVNMEGGSKPPERKMQRDKQDDTSENWFKVTIPFGIKYDKKWLLN
LIQSQCSIPFTPVQFHYEKMQAHFFVDNPNIAFMLKAISDKILDETDNKPQSHRTPSVIL
QLTTNQQCATSQRVLNRQRLPFDQDLMTRPTDLALVPRRYMTPSLSIHKEDMTQVNSEGE
VAKVHAPDLEKICADQSSLSTTMPDKSSNINSILELFPKLLSLDGQESHKPTLCGPEDHK
TLSACKEIFFGSESIKTMVLQFLKQYYFIYDNGDRQGLLNAYHPEACFTLTIPFSSIDLS
MNSLCEYFKFSRNMKILKDPYMRRQLLKHKKCDIIHFLRTLPKTQHDLTSFVVDICLQTE
KMLCFSVSGLFKEVDNSAQGCMHAFTRIFVVTHDNSSELCIINDKLSVTNVHEVPSASTP
VATSSTSYLPSFSQDQQEMVPTFCAQSGVNVDRSQKSLHDDQWNYNRAIQSLALLKVEDT
ISEDKFTQTDPRS
NT seq 1662 nt   +upstreamnt  +downstreamnt
atggggcgcagttctgaaactaaccccttgcgaagaagaatgagatgcaggcgtattttc
caacagagatttcttaactcgcctgctcacgtcagtgatacagtgcatacttcattttat
cagcagccagccatgagtaatcctcccatgcatacccgaagatacactccatatggcatt
ccatcccgttatcagagagtcagtgtacagaaatggaaccaaacggatgttaacatggag
ggagggtcaaaacctccagagagaaaaatgcagagggacaaacaagatgatacttcagag
aactggttcaaggtcacaattccctttggcataaaatatgataagaagtggctgctgaat
ttgatccagagccagtgcagcatccctttcactccggtgcagtttcactatgaaaagatg
caggcccatttttttgttgacaatcccaacattgcctttatgctgaaggccatcagtgac
aagattctagatgagactgataataagcctcagagtcacagaactccatctgtgattctg
cagctgactacaaaccaacaatgtgctacttctcagcgagttcttaaccggcagagactt
ccctttgaccaagatttgatgacccgtcctactgacttggcactggttcctagaaggtat
atgactccttccttgagtatccataaagaggatatgacccaggtgaactctgaaggggag
gtggccaaggtgcacgccccggatctagaaaagatatgtgcagaccaaagctctctgagt
actaccatgccggataagtccagtaatataaattcaattctggaattgttccccaagtta
ctaagcctggatggacaagaatcacataaaccaactctctgtggtcctgaagatcacaag
accttatcagcttgcaaggaaattttttttggatcagaatccataaagacaatggtccta
cagttcctgaagcagtattacttcatctatgacaatggagatcggcagggactcctcaat
gcttatcatcctgaggcttgcttcacactgaccatccccttcagttccattgacttatcc
atgaacagcttgtgtgagtacttcaagtttagcagaaatatgaaaattctcaaggatcct
tatatgcggaggcagctgctgaagcacaagaaatgtgacattattcacttccttcgtaca
ttgcccaaaactcaacatgacctcacctcctttgtggtggacatatgtttgcagacagaa
aagatgctctgcttctctgttagtgggttgttcaaggaagtggacaacagcgctcaaggg
tgcatgcatgccttcactcggatttttgttgttacccatgacaacagttcagaactctgt
atcatcaatgacaagctgtctgtgactaatgtccacgaggttcccagtgcctccacccct
gtggccacatcgtctaccagttatttgccttcattctctcaagatcaacaggagatggtg
ccaacattctgtgcccagtctggggtgaatgttgacaggtctcaaaaatcccttcatgat
gaccagtggaattacaacagagctatacaaagccttgctttgctcaaggtagaggacacg
atctcagaggataagttcacacagacagatccaagatcctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (6)   
   KEGG PATHWAY (6)   
Genome (1)   
   KEGG GENOME (1)   
Gene (19)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (10)   
   UniProt (1)   
   RefSeq(pep) (9)   
DNA sequence (11)   
   RefSeq(nuc) (9)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (53)   

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