KEGG   Mus musculus (house mouse): 27366
Entry
27366             CDS       T01002                                 
Symbol
Txnl4a, D18Wsu98e, Dim1, Txnl4, U5-15kD, U5-15kDa
Name
(RefSeq) thioredoxin-like 4A
  KO
K12859  U5 snRNP protein, DIM1 family
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    27366 (Txnl4a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:mmu03041]
    27366 (Txnl4a)
Spliceosome [BR:mmu03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    27366 (Txnl4a)
SSDB
Motif
Pfam: DIM1 Thioredoxin Thioredoxin_8 Thioredoxin_7
Other DBs
NCBI-GeneID: 27366
NCBI-ProteinID: NP_079575
MGI: 1351613
Ensembl: ENSMUSG00000057130
UniProt: P83877
Position
18:80250041..80269066
AA seq 142 aa
MSYMLPHLHNGWQVDQAILSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYL
VDITEVPDFNKMYELYDPCTVMFFFRNKHIMIDLGTGNNNKINWAMEDKQEMVDIIETVY
RGARKGRGLVVSPKDYSTKYRY
NT seq 429 nt   +upstreamnt  +downstreamnt
atgtcgtacatgcttccgcatctgcacaatggctggcaggtagaccaggccatcctttcg
gaggaggaccgcgtggtcgtcattcgtttcggacacgactgggaccccacttgcatgaag
atggacgaggttctgtacagcatcgccgaaaaggttaaaaattttgcagttatttatctt
gtggatattacagaagtgcctgacttcaacaagatgtacgagctgtatgacccctgcact
gtcatgttcttcttcagaaacaaacatatcatgattgatttgggcactggcaacaacaac
aagatcaactgggccatggaagacaagcaagaaatggttgacatcatagagaccgtgtac
cgtggcgcccgcaaaggccggggtctggtggtgtctcccaaggactattctaccaagtac
agatactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (158)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (146)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (6)   
   OC (1)   
Protein sequence (11)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (9)   
DNA sequence (79)   
   RefSeq(nuc) (13)   
   GenBank (33)   
   EMBL (33)   
Protein domain (4)   
   Pfam (4)   
All databases (256)   

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