KEGG   Mus musculus (house mouse): 276950
Entry
276950            CDS       T01002                                 
Symbol
Slfn8, mSLFN8
Name
(RefSeq) schlafen 8
  KO
K24459  schlafen family member 13 [EC:3.1.-.-]
Organism
mmu  Mus musculus (house mouse)
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:mmu03016]
    276950 (Slfn8)
Transfer RNA biogenesis [BR:mmu03016]
 Eukaryotic type
  tRNA degradation factors
   Other tRNA degradation factors
    276950 (Slfn8)
SSDB
Motif
Pfam: SLFN_GTPase-like SLFN_AlbA_2 B3R SLFN-g3_helicase UvrD_C_2 NPHP3_N ResIII AAA_22 nSTAND3 NACHT Viral_helicase1 AAA_33 NB-ARC AAA_14 AAA_17 AAA_16 AAA_19 AAA_30 ATP-synt_10 AAA_11 RNA_helicase
Other DBs
NCBI-GeneID: 276950
NCBI-ProteinID: NP_853523
MGI: 2672859
Ensembl: ENSMUSG00000035208
UniProt: B1ARD8
Position
11:complement(82892984..82911636)
AA seq 910 aa
METHPSLAVKWSCPDLTIYAGEVTIGEEDRNKMDSKKRKLEKTRITEAACALLNSGGGLI
AMQMTNKSEHPVEMGQDLEKSLRELIMSPNMQAFFETKQQEDQFYIFVKSWSCRPEDGST
KPRICSLGSSLYCRSITSKVAMDSREAFEFLKDKKACIKYRPTDDGAPPAKIPRAMCQNS
LESNPAFEIFQSKKLEYGQCLLFSESTSIEFKQFSTKHVQAYMKNIIPEYISAFANTQGG
YLFIGVDDKRIILGCPKDNVDRDSLKTVANETISKVPVFHFCSSKDKDKVSYETRVIDVF
QEGNLYGYLCVIKVEPFCCAVFSEAPISWMVDKEKGVYRLNTEEWVRMMVDFGPEASSKD
LSKDFECQLSLCNSPPHCRPVYSKKGLQHKVDLQQRLFQVSPDCLKYTPESLWKELCSQH
KRLKGLVKQQIRSFSCGLLILYRSWAVDLNLKEKQEVICDALLIAQNSPPILYTILGEQD
EQGQDYCNHTAFTLKQKLVNTGGYTGRVCVMTKVLCLSSQNNIETNGGSVSPINYPSSYN
LANIQEMQDLLQALVIVLLNFRSFLSDQLGCEILNLLTAQQYEILSKSLRKTRELFVHGL
PGSGKTIIAMKIMEKIRNTFHCETDSILYICENQPLRDFIRAKRICQAVTRKTFMNYRFK
TNSFQHIIVDEAQNFRTEDGNWYGKAKAISRRVKSCPGMFWIFLDYFQTSHLKESGLPDF
SRQYPREELTQVVRNGDKIAEFLQKELQKIRDNPPCSIPRQSLNIVHEFKWSQSVSGNIK
TEQFTLEDMVIYVADKCYDFLRKGYSLQDIAVLFSTDKEKKTYESMFLGEMRKRRRASEM
NHAYLCDSNMFDSIRRFSGLERSIVFGINPIATEQPISHNLLLCLASRAMKHLYILYFST
PEGHSSTEAC
NT seq 2733 nt   +upstreamnt  +downstreamnt
atggagacacatccctccttagcagtgaaatggtcgtgcccagacttgaccatctacgca
ggagaagtgactatcggagaagaagatagaaataaaatggactcaaagaaaagaaagctg
gagaagacaagaattacagaggctgcttgtgctctgttaaactctggaggaggattaatt
gctatgcaaatgactaacaagagtgagcatcctgtggagatgggacaggacttggaaaag
tctttgagagagcttattatgtcccctaatatgcaggctttctttgagaccaagcaacaa
gaggaccagttctacatttttgttaaatcttggagctgcaggcctgaagatggttctact
aagcctcgaatttgcagcctgggctcttctctgtactgtagatctataacttctaaggtt
gccatggattcaagagaagcatttgaatttctgaaagataagaaggcatgtatcaaatac
aggcctactgatgacggagctccaccggctaaaattccgagagccatgtgtcagaacagc
cttgaatcaaatccagcttttgaaattttccaaagtaagaaacttgaatatggccaatgc
ttgcttttctctgaatccacatctatagagtttaaacaattctctaccaaacacgtccaa
gcatatatgaaaaacataattccagaatacatctccgcatttgcaaacacccagggaggc
tatcttttcattggagtggatgataagagaatcatcttgggatgcccaaaagacaacgtt
gaccgtgactctttgaaaactgtggcgaatgaaacaatatccaaggtgccagttttccat
ttttgttcatctaaagacaaggacaaggtgtcttatgagaccagagtcatagatgtgttt
caagagggaaatttgtatggttatctctgtgtgatcaaagtagagccgttctgctgtgca
gtgttctcagaggctcccatttcatggatggtagacaaggagaaaggtgtctacagactg
aacactgaggaatgggtacgcatgatggtggattttggcccagaggcatcttccaaagat
ctatctaaagattttgaatgtcagctgagtctatgcaacagccccccacactgcagacca
gtgtattctaaaaaaggactgcagcataaagttgacctgcagcagcgtttatttcaagtg
tcaccagactgtttaaagtatactcctgaatctctctggaaggagctgtgttcccagcat
aagagactaaagggtttagtaaagcagcaaatacgttctttctcctgtggtttgctgatc
ctctatagaagctgggctgtggacctgaacctgaaggagaagcaggaagtcatctgtgat
gctctgctgattgcacagaatagccccccaatcctctacaccatccttggggagcaggat
gagcagggtcaggactactgcaaccacactgcctttactctgaagcagaagctggtgaac
actggtggctacactgggagagtgtgtgtcatgaccaaggttctctgcctgagttctcag
aacaatattgagaccaatgggggctcagtctctcctattaattacccaagttcctataac
cttgcaaacatccaggaaatgcaggacttgctgcaggcccttgtgattgtcttgctcaac
ttcagatctttcttgagcgaccagcttggctgtgaaattttgaatcttctcacagcccaa
cagtatgagattctctcaaaaagtctccgcaaaaccagagaactatttgtgcatggcttg
ccgggctcagggaagacaatcatagccatgaaaatcatggaaaagatcagaaacacattt
cactgtgaaacagatagtatcctctacatctgtgaaaatcagccattgagggacttcatc
cgggcaaaaagaatctgccaggcagtgacccggaaaaccttcatgaattatagatttaag
acaaacagtttccaacacatcattgttgatgaagcccagaatttccgcactgaggatgga
aactggtatgggaaggcaaaagcaatctctcgaagagtgaaaagttgtcctggaatgttc
tggatatttctagactattttcagaccagtcatttgaaggagagtggcctcccagatttc
tcacgccagtatccaagggaagagctcacacaagtagtacgcaatggagataaaatagct
gagttcctacaaaaagagttgcaaaaaatcagagataaccctccatgcagcatcccccga
cagtccctaaacattgtccatgaatttaagtggtcccaaagtgtatcaggcaacattaaa
actgaacaattcactttggaagacatggtaatctatgtagcagataagtgttatgatttc
ttgcgtaaaggctattctctccaagatattgcagtgcttttcagcacagataaggagaag
aaaacctatgagtctatgttcctcggagaaatgaggaagaggaggagagcatctgagatg
aatcacgcgtatctctgtgattctaacatgtttgacagcatccgtcgattctcaggactg
gaaagaagcattgtgtttggtatcaatcccattgcaactgagcagcccatttcccacaac
ctattgctctgcctggcttccagagcaatgaaacatctatatatcctgtatttttcaact
cctgaggggcatagctcaacggaggcatgctga

  All links  
Gene (12)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (1)   
   OC (1)   
Protein sequence (5)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (3)   
DNA sequence (13)   
   RefSeq(nuc) (3)   
   GenBank (5)   
   EMBL (5)   
Protein domain (21)   
   Pfam (21)   
All databases (51)   

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