KEGG   Mus musculus (house mouse): 30960
Entry
30960             CDS       T01002                                 
Symbol
Vapa, 33kDa, VAMP-A, VAP-33, VAP-A, VAP33
Name
(RefSeq) vesicle-associated membrane protein-associated protein A isoform 2
  KO
K06096  vesicle-associated membrane protein-associated protein A
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu04979  Cholesterol metabolism
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09150 Organismal Systems
  09154 Digestive system
   04979 Cholesterol metabolism
    30960 (Vapa)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:mmu04131]
    30960 (Vapa)
Membrane trafficking [BR:mmu04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Others
   Others
    30960 (Vapa)
 Autophagy
  ER-phagy
   Other ER-phagy associated proteins
    30960 (Vapa)
SSDB
Motif
Pfam: Motile_Sperm Cep192_D6 Cep192_D3 Ig_CFAP65_4th bZIP_1 YabA ASH Ig-like_IP5PC_F bHLH_IRO3 HYDIN_VesB_CFA65-like_Ig
Other DBs
NCBI-GeneID: 30960
NCBI-ProteinID: NP_038961
MGI: 1353561
Ensembl: ENSMUSG00000024091
UniProt: Q9WV55
Structure
Position
17:complement(65887048..65925441)
AA seq 249 aa
MASASGAMAKHEQILVLDPPSDLKFKGPFTDVVTTNLKLQNPSDRKVCFKVKTTAPRRYC
VRPNSGIIDPGSIVTVSVMLQPFDYDPNEKSKHKFMVQTIFAPPNISDMEAVWKEAKPDE
LMDSKLRCVFEMPNENDKLNDMEPSKAVPLNASKQDGPLPKPHSVSLNDTETRKLMEECK
RLQGEMMKLSEENRHLRDEGLRLRKVAHSDKPGSTSAVSFRDNVTSPLPSLLVVIAAIFI
GFFLGKFIL
NT seq 750 nt   +upstreamnt  +downstreamnt
atggcgtccgcctccggggccatggcgaagcacgagcagatcctggtcctcgaccctcct
tcagacctcaaattcaaaggccccttcacagatgtagtcactacaaatcttaaattgcaa
aatccatcggatagaaaagtgtgtttcaaagtgaagactacagcacctcgccggtactgt
gtgcggcccaacagtgggattattgacccggggtcaattgtgactgtttcagtaatgctg
caaccctttgattatgatccgaatgaaaagagtaaacataagttcatggtacagacaatt
tttgctccaccaaacatttcagatatggaagctgtgtggaaagaagcaaaacctgatgaa
ttaatggattctaaattgagatgtgtgtttgaaatgccgaatgaaaatgataagctgaat
gatatggaacctagcaaagctgttccactgaatgcatccaaacaagacggacccctgcca
aaaccacacagtgtttcactcaatgatacggaaacaaggaaactgatggaagagtgcaag
cgactccagggagaaatgatgaagctctcagaagaaaaccgacacctgagagatgaaggc
ctaaggctcagaaaggtagcacattcggataaacctggatccacctcagccgtgtccttc
agagataatgtcaccagtcctcttccttctcttctggttgtaattgcagccattttcatt
ggattctttctagggaaattcatcttgtag

  All links  
Gene (10)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (1)   
   OC (1)   
Protein sequence (6)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (4)   
DNA sequence (34)   
   RefSeq(nuc) (4)   
   GenBank (15)   
   EMBL (15)   
3D Structure (1)   
   PDB (1)   
Protein domain (10)   
   Pfam (10)   
All databases (61)   

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