KEGG   Mus musculus (house mouse): 319618
Entry
319618            CDS       T01002                                 
Symbol
Dcp1b, B930050E02Rik
Name
(RefSeq) decapping mRNA 1B
  KO
K12611  mRNA-decapping enzyme 1B [EC:3.-.-.-]
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    319618 (Dcp1b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mmu03019]
    319618 (Dcp1b)
Messenger RNA biogenesis [BR:mmu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     319618 (Dcp1b)
  mRNA degradation factors
   5'-3' decay
    Decapping complex
     319618 (Dcp1b)
SSDB
Motif
Pfam: DCP1 mRNA_decap_C WH1
Other DBs
NCBI-GeneID: 319618
NCBI-ProteinID: NP_001028551
MGI: 2442404
Ensembl: ENSMUSG00000041477
UniProt: B9EIX0
Position
6:119152214..119198575
AA seq 578 aa
MAAAAAGGLPGKGHDISLAALRRHDPYISRIVDVASQVALYTFGHRANEWEKTGVEGTLF
VYTRSASPKHGFTIMNRLSMENRTEPITKDLDFQLQNPFLLYRNGTLSIYGIWFYDKEEC
QRIAKLMKNLTQSEQLKACHGAGSSPVTLSSGEGQEVDILQMLTKAKDEYTKCKTCSEPK
QMTNSSAICDNPKLIKPVPVRPSSSQRLQGPAPSKTSDPEPQHLSLTALFGKQDKAPCQE
TVKPSRTFAHHHHHHHQQQQETRPVHHGVACSLSCEEPRKLSLPVEKQLCPAIQKLMLGS
PGLHPLPQHPEQWSCKSGSPSPAGGILPGPVQLGSPWNGRVAHCTQSTCRGHKLLEQLQG
APGAVHKYNPCAPTGPAVATQVAPGQSVAQSQLVYFSGPLQPPAPGHQALRKEQGALPAQ
AVSLSGSQESSPTVLPTQELLRKLQVVHQEQQAAPRPALAARFPVSAQGSGTEKPLEAWV
SKTASMEKQAPLLQSTCAPLRETDNGLMALGGQELPAASSSLLLPLQNWESSTVASRPLT
RLQLQEALLNLIQNDDNFLSIIYEAYLFSVTQAAMRTT
NT seq 1737 nt   +upstreamnt  +downstreamnt
atggcggccgcggcggcaggtggcctgcctgggaagggacacgatatcagcctggcagcc
ctgcggcgccacgacccctacatcagtcgcatcgtggacgtggccagccaggtggctctg
tacactttcggccatcgggccaacgagtgggagaagactggagtggagggaaccttgttt
gtttatacgaggtctgcctccccaaagcacggattcaccattatgaataggctcagcatg
gaaaacagaacagaacccattactaaagacctggacttccagctccagaaccctttcctt
ctctacagaaacggcacactgtccatttatggaatttggttttatgataaggaagagtgc
cagagaattgcaaaactaatgaaaaacctcactcagagcgaacagttgaaagcctgtcat
ggagccggatcctcccccgtgaccttgagctcaggagagggccaagaagtagatatcctg
cagatgctcaccaaggccaaggatgagtacaccaagtgtaagacctgttccgagccaaaa
cagatgaccaattcctctgccatctgtgacaaccctaaacttatcaaacctgtccccgtg
agacccagcagcagccagaggctgcaaggacctgcgcccagcaagacctcggaccctgag
cctcagcacttatctttaacagcactatttgggaaacaagacaaagctccctgtcaggaa
actgtaaagccctcccggacctttgcccaccaccaccaccatcaccaccagcagcagcaa
gagacgcgtccagttcatcacggggtcgcatgctccctgtcctgtgaggagcccaggaag
ctctcactcccggtggagaagcagctctgcccggccattcagaaactcatgctcgggagc
ccggggctgcaccccctgcctcagcaccctgaacagtggtcctgcaaaagtggcagcccc
agtcctgccgggggaattctccctggtcctgtccagctggggtccccctggaatggcagg
gttgcacactgcacacagagcacttgcagaggccacaagctattagagcagcttcaaggt
gcccctggggcagtgcataagtataacccctgtgcgcctaccggtccagctgtggccact
caggtggctccgggccagagtgtggcccaatcacagctggtgtatttcagtggccccctt
caacctcccgccccaggacaccaagctctcaggaaggagcagggtgcactgcctgcacaa
gcggtgtccctctctggcagccaggagagcagccccaccgtgctccctacgcaggagctg
ctaaggaagctccaggtagtacaccaggagcagcaggcggccccccggccagccttggca
gccaggttccctgtgtcagcccagggatcagggacagaaaagcccttggaagcctgggtc
agcaagacagccagcatggagaagcaggctcctcttctgcagtctacctgtgccccactg
agggagactgataatgggctcatggccctaggaggccaagaacttcctgctgcctcctcc
agcctcctcctgcccctgcagaactgggagtcctccaccgtggccagcaggcccctcacc
aggctgcagctccaggaggcactgctgaacctcatccagaatgatgacaacttcttaagc
ataatctatgaagcctatctcttcagcgtgacacaagcagccatgagaaccacgtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (34)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (28)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (14)   
   UniProt (1)   
   RefSeq(pep) (13)   
DNA sequence (33)   
   RefSeq(nuc) (13)   
   GenBank (10)   
   EMBL (10)   
Protein domain (3)   
   Pfam (3)   
All databases (88)   

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