KEGG   Mus musculus (house mouse): 320632
Entry
320632            CDS       T01002                                 
Symbol
Snrnp200, A330064G03Rik, Ascc3l1, HELIC2, U5-200-KD, U5-200KD
Name
(RefSeq) small nuclear ribonucleoprotein 200 (U5)
  KO
K12854  pre-mRNA-splicing helicase BRR2 [EC:5.6.2.6]
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    320632 (Snrnp200)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:mmu03041]
    320632 (Snrnp200)
Enzymes [BR:mmu01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     320632 (Snrnp200)
Spliceosome [BR:mmu03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    320632 (Snrnp200)
 Complex C
   U5 SnRNP specific factors
    320632 (Snrnp200)
SSDB
Motif
Pfam: Sec63 SNRNP200_wHTH DEAD Helicase_PWI ResIII Helicase_C BRR2_plug AAA_22 AAA_30 PhoH SWI2_SNF2 DUF603
Other DBs
NCBI-GeneID: 320632
NCBI-ProteinID: NP_796188
MGI: 2444401
Ensembl: ENSMUSG00000003660
UniProt: Q6P4T2
Position
2:127050306..127082373
AA seq 2136 aa
MADVTARSLQYEYKANSNLVLQADRSLIDRTRRDEPTGEVLSLVGKLEGTRMGDKAQRTK
PQMQEERRAKRRKRDEDRHDMNKMKGYTLLSEGIDEMVGIIYKPKTKETRETYEVLLSFI
QAALGDQPRDILCGAADEVLAVLKNEKLRDKERRREIDLLLGQTDDTRYHVLVNLGKKIT
DYGGDKEIQNMDDNIDETYGVNVQFESDEEEGDEDVYGEVREEASDDDMEGDEAVVRCTL
SANLVASGELMSSKKKDLHPRDIDAFWLQRQLSRFYDDAIVSQKKADEVLEILKTASDDR
ECENQLVLLLGFNTFDFIKVLRQHRMMILYCTLLASAQSEPEKERIVGKMEADPELSKFL
YQLHETEKEDLIREERSRRERVRQSRMDTDLETMDLDQGGEALAPRQVLDLEDLVFTQGS
HFMANKRCQLPDGSFRRQRKGYEEVHVPALKPKPFGSEEQLLPVEKLPKYAQAGFEGFKT
LNRIQSKLYRAALETDENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIY
IAPMRSLVQEMVGSFGKRLATYGITVAELTGDHQLCKEEISATQIIVCTPEKWDIITRKG
GERTYTQLVRLIVLDEIHLLHDDRGPVLEALVARAIRNIEMTQEDVRLIGLSATLPNYED
VATFLRVDPAKGLFYFDNSFRPVPLEQTYVGITEKKAIKRFQIMNEIVYEKIMEHAGKNQ
VLVFVHSRKETGKTARAIRDMCLEKDTLGLFLREGSASTEVLRTEAEQCKNLELKDLLPY
GFAIHHAGMTRVDRTLVEDLFADKHIQVLVSTATLAWGVNLPAHTVIIKGTQVYSPEKGR
WTELGALDILQMLGRAGRPQYDTKGEGILITSHGELQYYLSLLNQQLPIESQMVSKLPDM
LNAEIVLGNVQNAKDAVNWLGYAYLYIRMLRSPTLYGISHDDLKGDPLLDQRRLDLVHTA
ALMLDKNNLVKYDKKTGNFQVTELGRIASHYYITNDTVQTYNQLLKPTLSEIELFRVFSL
SSEFKNITVREEEKLELQKLLERVPIPVKESIEEPSAKINVLLQAFISQLKLEGFALMAD
MVYVTQSAGRLMRAIFEIVLNRGWAQLTDKTLNLCKMIDKRMWQSMCPLRQFRKLPEEVV
KKIEKKNFPFERLYDLNHNEIGELIRMPKMGKTIHKYVHLFPKLELSVHLQPITRSTLKV
ELTITPDFQWDEKVHGSSEAFWILVEDVDSEVILHHEYFLLKAKYAQDEHLITFFVPVFE
PLPPQYFIRVVSDRWLSCETQLPVSFRHLILPEKYPPPTELLDLQPLPVSALRNSAFESL
YQDKFPFFNPIQTQVFNTVYNSDDNVFVGAPTGSGKTICAEFAILRMLLQNSEGRCVYIT
PMEALAEQVYMDWYEKFQDRLNKKVVLLTGETSTDLKLLGKGNIIISTPEKWDILSRRWK
QRKNVQNINLFVVDEVHLIGGENGPVLEVICSRMRYISSQIERPIRIVALSSSLSNAKDV
AHWLGCSATSTFNFHPNVRPVPLELHIQGFNISHTQTRLLSMAKPVYHAITKHSPKKPVI
VFVPSRKQTRLTAIDILTTCAADIQRQRFLHCTEKDLIPYLEKLSDSTLKETLLNGVGYL
HEGLSPMERRLVEQLFSSGAIQVVVASRSLCWGMNVAAHLVIIMDTQYYNGKIHAYVDYP
IYDVLQMVGHANRPLQDDEGRCVIMCQGSKKDFFKKFLYEPLPVESHLDHCMHDHFNAEI
VTKTIENKQDAVDYLTWTFLYRRMTQNPNYYNLQGISHRHLSDHLSELVEQTLSDLEQSK
CISIEDEMDVAPLNLGMIAAYYYINYTTIELFSMSLNAKTKVRGLIEIISNAAEYENIPI
RHHEDNLLRQLAQKVPHKLNNPKFNDPHVKTNLLLQAHLSRMQLSAELQSDTEEILSKAI
RLIQACVDVLSSNGWLSPALAAMELAQMVTQAMWSKDSYLKQLPHFTSEHIKRCTDKGVE
SVFDIMEMEDEERNALLQLTDSQIADVARFCNRYPNIELSYEVVDKDSIRSGGPVVVLVQ
LEREEEVTGPVIAPLFPQKREEGWWVVIGDAKSNSLISIKRLTLQQKAKVKLDFVAPATG
GHNYTLYFMSDAYMGCDQEYKFSVDVKEAETDSDSD
NT seq 6411 nt   +upstreamnt  +downstreamnt
atggcggatgtgactgcccgcagtttgcagtacgagtacaaggcgaactcaaatcttgtg
ctccaagctgaccgctctctcattgaccggacccgccgggatgaaccgacgggagaggtt
ctgtccctggttgggaagttggagggaacccgaatgggagataaggctcaacggaccaaa
ccacagatgcaggaagaaagacgggccaagaggagaaaacgtgatgaggaccggcatgac
atgaacaagatgaaaggctacacgctgctgtctgagggcattgatgagatggtgggcatc
atctacaagcctaagacgaaggagacccgagagacctacgaggtgctgctcagcttcatc
caggctgcgctgggagatcagcctcgagatattctttgtggagcagctgatgaagtcctg
gctgtgctgaagaatgaaaagcttcgagacaaggagagaagacgggagattgacctgctg
ctgggtcagacagatgataccagataccatgtgctggtaaacctgggcaagaagatcaca
gactacggtggcgacaaggagatacagaatatggatgacaacattgatgagacttatggt
gtgaacgtgcagtttgagtctgatgaggaggaaggtgatgaagatgtgtatggggaagtc
cgagaagaagcttctgatgatgacatggaaggggacgaagctgttgtgcgctgcaccctc
tctgctaatcttgtagcctcaggcgaactgatgagttctaagaagaaggatttgcaccct
cgggatatcgatgccttctggctgcagcgacagctcagtcgtttctatgatgatgccatt
gtgtcacagaagaaggcagatgaggtgttggagattttgaagacagcaagtgatgaccga
gaatgtgagaaccaactggttttgctccttggtttcaacacgtttgacttcattaaagtg
ttgcggcagcacaggatgatgattttatactgtaccttgttggccagtgctcagagtgaa
cctgaaaaggagaggatcgtgggaaagatggaagctgatccagagctctccaagttcctc
tatcagctccatgagactgagaaggaggacctgatcagagaagaaaggtcccggagagag
agagtccgtcagtcccgaatggacacagatctggaaaccatggatttggaccagggtgga
gaggctctggctccaaggcaggttctggatttggaggaccttgtttttacccaaggaagc
cacttcatggccaataagcgctgccagcttcctgacgggtccttccgacgccagcgtaaa
ggctatgaagaggtgcatgtgcctgctttgaagcccaagccctttggctcagaagaacaa
ttgctcccggtggagaagctgccaaagtatgcccaggcaggatttgagggcttcaaaacg
ctgaaccggatccagagtaagctctaccgtgctgccctggagactgatgagaacctgctg
ctgtgtgctcccactggtgcgggcaagaccaacgtggccctgatgtgtatgctccgagag
atagggaaacacatcaacatggacggcacaatcaatgtggatgacttcaagatcatctac
atagctcccatgcggtccctggtccaggagatggtgggcagttttggaaagcgcctggcc
acatatggcatcactgttgctgagctgactggggatcaccagctatgcaaggaggaaatc
agtgccacacagattatcgtctgcacccctgagaagtgggacatcatcacacgcaagggc
ggggagcgcacctacacccagctggtgcgactcattgtcttggatgagatccatcttcta
catgatgacagaggtcctgtcttagaagctttggtggccagggccatccgaaacattgag
atgacccaagaagatgtccgactcattggtctcagtgctaccctccccaactatgaagat
gtggccacctttctgcgagtcgaccctgctaagggcctcttctactttgataacagcttc
cgccccgtgcctctggaacaaacatatgtgggcatcacagagaaaaaagctatcaaacgt
ttccagatcatgaatgaaatagtctatgagaaaatcatggaacatgctggaaaaaatcag
gtgctcgtgtttgtccattctcgaaaagaaactgggaagacagcaagggcaatccgtgac
atgtgtctggagaaggacactttgggtctgtttcttcgcgagggttctgcctccactgaa
gtccttcgtacagaagcagagcagtgcaagaacttggagctgaaggatcttttgccctat
ggctttgctattcatcatgcaggcatgactagagttgaccgaacacttgtagaagatctt
tttgctgacaagcatattcaggttttagtttccaccgcaactctggcgtggggtgtaaat
cttcctgcacatacagtcatcattaaaggtacccaagtgtacagtccagagaaggggcgt
tggacagagctgggagcactggatatcctgcagatgctgggccgtgctggacggccgcag
tatgacaccaagggtgaaggcatcctcatcacatcccatggggagctccagtactacctc
tccctcctcaaccagcagctgcctatcgagagccagatggtctccaagctgcctgacatg
ctcaatgcggaaattgttctgggcaatgtccagaatgcaaaggatgcagtgaactggctg
ggctatgcctacctatacatccgaatgctccggtcccctaccctctatggcatttctcat
gatgacctcaagggagatcccttgctggaccagcgccgactcgatcttgttcacactgct
gccttgatgctggacaagaacaatctggtcaagtacgacaagaagacaggcaacttccag
gtgacagaacttggccggatagcaagtcactactatatcaccaatgatactgtgcagacc
tacaaccagctgctgaagcctactctgagtgagattgagcttttccgagtgttctccttg
tcctcagagttcaagaacatcactgtaagagaggaggagaagctggagctgcagaagttg
ctggagagagtgcccatccctgtaaaggagagcattgaggaacccagcgctaagatcaac
gtgcttctccaagccttcatctcacagctgaaactcgaaggctttgcgctgatggctgac
atggtgtatgtgacccagtcggctggccggttgatgcgtgcaatcttcgaaattgtcctg
aaccgaggttgggcacagcttacagataagaccctgaatctctgcaagatgattgacaag
cgcatgtggcagtccatgtgtcctcttcgccagttccgaaaacttcctgaggaagtagtg
aagaagattgagaagaaaaacttcccctttgagcggctgtatgacttgaatcataatgag
ataggtgaacttattcgaatgccgaagatggggaagaccatccacaagtatgtccatctt
ttccccaagttggagttgtcagtgcacctgcagcctattacacgctctacgctgaaagta
gagctgactatcacaccagatttccagtgggatgaaaaggtccatggttcgtcagaggca
ttttggattctggtggaggatgtggacagtgaggtgattctgcaccatgaatattttctg
ctgaaggccaagtatgcccaggatgagcacctcatcacgttctttgttccagtctttgaa
ccactacctcctcagtacttcattcgagtagtgtctgatcgctggctctcttgtgagacg
cagctacctgtctccttccggcatctgatcctaccagagaagtacccacctccaaccgaa
ctgttggacctgcagccattgcctgtgtctgctctgagaaacagtgcttttgagagcctt
taccaagataaatttcctttcttcaatcccatccagactcaagtatttaataccgtgtac
aacagtgatgataacgtgtttgtgggggcccccacgggcagcgggaagactatctgcgcg
gagtttgccatccttcggatgctgctgcagaattctgagggacgctgtgtctacattacc
cctatggaggctctggcagagcaggtatacatggactggtatgagaagtttcaggacagg
ctcaacaagaaggtagtgctgctgacgggggagaccagcacagatctgaagctcctgggc
aaaggcaacatcatcatcagtacccctgagaagtgggacatcctctctcggaggtggaag
cagcgcaagaacgtccagaacattaacctctttgtggtggatgaggtccaccttattggg
ggcgagaatgggcctgtcttggaagtgatctgctcccggatgcgctacatctcctcccag
attgagcggcccattcgcattgtggcacttagctcctcactctccaatgccaaggatgtg
gctcactggctgggctgcagtgccacctccaccttcaacttccatcctaatgtgcgccct
gtacctttggaactgcacatccagggcttcaacatcagtcacacacagactcgcctgctc
tctatggccaagcctgtgtaccatgctatcaccaaacactcacccaagaagcctgtcatc
gtttttgtcccatctcgtaagcagacccgcctcactgcaatagacatcctcactacctgt
gcagcagacatccagcggcagaggttcctgcactgcaccgagaaggacctgatcccttac
ctggagaagctcagtgacagcacactcaaagagaccctgttaaatggggtgggctacctg
catgaaggcctgagccccatggagaggcgcctggtagagcagctcttcagctccggggct
atccaggtggtggtagcttctcggagtctctgctggggcatgaatgttgctgctcatcta
gtgatcatcatggatactcagtactacaatggcaagatccatgcctatgtggattacccc
atctatgatgtgcttcagatggtgggccatgccaaccggcccctgcaggatgatgagggg
cgctgtgtcatcatgtgtcagggctctaaaaaggattttttcaaaaaatttttgtatgag
ccattgccagtagagtctcacctggaccactgtatgcatgaccacttcaatgctgagatt
gtcaccaagaccattgagaacaagcaggatgctgtggactacctcacctggacctttctg
tatcgcagaatgacacagaaccccaattactacaacctgcaggggatatcccatcgtcat
ctgtctgaccacctgtcagagctggtggagcagaccctcagtgacctggagcagtccaaa
tgcatcagtattgaggacgagatggatgtggcccctctgaacctgggcatgattgctgcc
tactattacataaactacaccaccattgagctcttcagcatgtctctgaatgctaaaacc
aaggttcgaggacttattgagatcatttccaatgcagcagagtatgagaacattccaatc
aggcatcatgaagacaacctcctgcgccagttggctcagaaggtcccccacaagctgaat
aaccccaagttcaatgatccacatgtgaagaccaatctgctgctgcaggctcacctgtcc
cgcatgcagctaagtgctgaactacagtcagacacagaggagatccttagtaaggcaatc
cggctaattcaggcctgtgtggatgtactctccagcaatgggtggcttagtcctgctctg
gcagccatggaactggcccagatggtcacccaagccatgtggtctaaggactcttacctg
aagcagctgccacacttcacctcagagcatatcaaacgttgcacagataagggagtggag
agtgtttttgacatcatggagatggaggatgaagaacggaatgcattgcttcagttgact
gacagccagattgcagatgtggcccgcttctgtaaccgctacccgaatattgaactgtcc
tatgaagtggtggataaagacagcatccgcagtggcggaccagttgtggtgctagtgcaa
ctggagcgagaggaggaagtcacgggcccagttattgcacctctcttcccacagaaacgt
gaagagggctggtgggttgtgattggagacgccaagtccaacagcctcatctccatcaag
aggctgaccctgcagcagaaagccaaggtgaagctagactttgtggccccagccacaggt
ggccacaactataccctgtacttcatgagtgacgcatacatgggctgtgaccaggagtat
aagttcagtgtggatgtgaaagaagctgagacagacagtgattcagattga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (31)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (24)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (19)   
   RefSeq(nuc) (1)   
   GenBank (9)   
   EMBL (9)   
Protein domain (12)   
   Pfam (12)   
All databases (71)   

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