KEGG   Mus musculus (house mouse): 329064
Entry
329064            CDS       T01002                                 
Symbol
Pkd2l1, B830002B15, PCL, PKD2L, Pkdl, TRPP3
Name
(RefSeq) polycystic kidney disease 2-like 1
  KO
K04990  polycystin 2L1
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu04742  Taste transduction
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09150 Organismal Systems
  09157 Sensory system
   04742 Taste transduction
    329064 (Pkd2l1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:mmu03037]
    329064 (Pkd2l1)
   04040 Ion channels [BR:mmu04040]
    329064 (Pkd2l1)
Cilium and associated proteins [BR:mmu03037]
 Primary cilia and associated proteins
  Other primary cilia associated proteins
   329064 (Pkd2l1)
Ion channels [BR:mmu04040]
 Voltage-gated cation channels
  Transient receptor potential channel (TRP)
   329064 (Pkd2l1)
SSDB
Motif
Pfam: PKD_channel Polycystin_dom Ion_trans Fer4_24 EF-hand_8 HBS1_N
Other DBs
NCBI-GeneID: 329064
NCBI-ProteinID: NP_852087
MGI: 1352448
Ensembl: ENSMUSG00000037578
UniProt: A2A259
Structure
Position
19:complement(44136076..44235355)
AA seq 760 aa
MNSMESPKNQELQTLGNRAWDNPAYSDPPSPNRTLRICTVSSVALPETQPKKPEVRCQEK
TQRTLVSSCCLHICRSIRGLWGTTLTENTAENRELYVKTTLRELVVYIVFLVDICLLTYG
MTSSSAYYYTKVMSELFLHTPSDSGVSFQTISSMSDFWDFAQGPLLDSLYWTKWYNNQSL
GRGSHSFIYYENLLLGAPRLRQLRVRNDSCVVHEDFREDILNCYDVYSPDKEDQLPFGPQ
NGTAWTYHSQNELGGSSHWGRLTSYSGGGYYLDLPGSRQASAEALQGLQEGLWLDRGTRV
VFIDFSVYNANINLFCILRLVVEFPATGGTIPSWQIRTVKLIRYVNNWDFFIVGCEVVFC
VFIFYYVVEEILEIHLHRLRYLSSVWNILDLVVILLSIVAVGFHIFRTLEVNRLMGKLLQ
QPDTYADFEFLAFWQTQYNNMNAVNLFFAWIKIFKYISFNKTMTQLSSTLARCAKDILGF
AIMFFIVFFAYAQLGYLLFGTQVENFSTFVKCIFTQFRIILGDFDYNAIDNANRILGPVY
FVTYVFFVFFVLLNMFLAIINDTYSEVKEELAGQKDQLQLSDFLKQSYNKTLLRLRLRKE
RVSDVQKVLKGGEPEIQFEDFTSTLRELGHEEHEITAAFTRFDQDGDHILDEEEQEQMRQ
GLEEERVTLNAEIENLGRSVGHSPPGELGAEAARGQSWVSGEEFDMLTRRVLQLQCVLEG
VVSQIDAVGSKLKMLERKGELAPSPGMGEPAVWENLYNPS
NT seq 2283 nt   +upstreamnt  +downstreamnt
atgaatagtatggaaagccccaagaatcaggagctacaaaccctggggaacagagcctgg
gacaatcctgcctacagcgaccctccttccccgaacaggacgctgaggatctgcactgtc
tccagtgtggctctccctgagactcaacccaaaaagccagaagtcagatgccaggagaag
acacagagaaccctggtgtccagctgctgtctccatatctgtcggagcatcagaggactg
tgggggacaacgctgactgagaacacagccgagaacagggagctttatgtcaagaccacc
ctgagggagcttgtggtatacatagtgttcctcgtggacatctgtctgttgacctacgga
atgacaagttctagtgcctattactacaccaaagtgatgtctgaattgttcctacacacc
ccatccgactctggagtctccttccaaaccatcagcagcatgtcagacttctgggatttt
gctcagggcccactcctggacagtttgtactggacaaagtggtacaacaaccagagcctg
gggcgtggctcccactccttcatctactatgagaacctgctcctgggagccccaaggttg
cggcagctgcgcgtgcgcaatgactcctgtgtggttcatgaagacttccgggaggacatt
ttgaactgttatgatgtgtactcgccggacaaagaagatcagctcccctttggacctcag
aacggcacagcgtggacataccattcccagaatgagctgggtggctcctcccactggggc
aggctcacaagctacagcgggggtggctactacttggatcttccaggatcccgacaagcc
agtgcagaggccctccaaggactccaggagggactgtggctggacaggggcactcgggtg
gtctttatcgacttctccgtctacaatgccaacatcaatcttttctgtattctgagactg
gtggtagagtttccagccacaggagggaccatcccatcctggcagatccgcacagttaag
ctgatccgctatgtgaataactgggacttcttcattgtgggctgtgaagttgtcttctgt
gtcttcatcttctattatgtggtggaggaaatcctggaaatccacctgcatcggcttcgc
tacctcagcagcgtctggaacattctggacctggtggtcatcttgctctccatcgtggct
gtgggtttccacatattccgaaccctggaagtgaaccgactgatgggaaagcttctgcaa
cagccagacacgtatgcagactttgagttcctggccttctggcagactcagtacaataac
atgaacgcggtcaaccttttctttgcttggatcaagatattcaagtatatcagcttcaac
aagaccatgacacagctctcctccaccctggctcgctgtgccaaggacatcctgggcttt
gccatcatgttcttcattgtcttcttcgcttacgcccagcttggctacctgctttttggg
acccaagtggaaaactttagcactttcgtcaagtgcattttcactcagttccggataatc
cttggggattttgactacaatgccatcgacaatgccaacagaatcctgggccctgtgtac
tttgtcacctatgtcttcttcgtcttcttcgtgctcctgaacatgttcctggccatcatc
aacgacacatactccgaggtcaaggaggagctggctggccagaaggatcagttgcagctt
tctgacttcctgaaacagagctacaacaagaccctactaaggctgcgcctgaggaaagag
cgggtttctgatgtgcagaaggtcctgaagggtggggaaccagagatccagtttgaagat
ttcaccagcaccttgagggaactggggcacgaggagcacgagatcaccgctgccttcacc
aggtttgatcaggatggggaccacatactggatgaggaggagcaggaacagatgcggcag
ggactggaagaggagagggtgaccctcaatgctgagattgagaacctaggccggtctgtt
ggacacagccccccaggcgaattgggcgcggaggctgccagaggacaaagctgggtttct
ggagaagaattcgacatgctcacaaggagagttctgcagctgcagtgtgttctggaagga
gttgtgtcccagattgatgctgtaggctcaaagctgaagatgctggagaggaaaggggag
ctggctccctccccaggaatgggggaaccagctgtttgggagaacctgtataatccgtcc
tag

  All links  
Gene (28)   
   RefGene (24)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (7)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (5)   
DNA sequence (16)   
   RefSeq(nuc) (6)   
   GenBank (5)   
   EMBL (5)   
3D Structure (3)   
   PDB (3)   
Protein domain (6)   
   Pfam (6)   
All databases (60)   

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