KEGG   Mus musculus (house mouse): 432613
Entry
432613            CDS       T01002                                 
Symbol
Trim80, 4933422H20Rik, Trim47l
Name
(RefSeq) tripartite motif-containing 80
  KO
K12023  tripartite motif-containing protein 47
Organism
mmu  Mus musculus (house mouse)
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:mmu04121]
    432613 (Trim80)
Ubiquitin system [BR:mmu04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    432613 (Trim80)
SSDB
Motif
Pfam: SPRY zf-RING_UBOX zf-C3HC4_4 zf-B_box zf-C3HC4 zf-C3HC4_3 zf-RING_2 zf-C3HC4_2 zf-RING_5 TRAF3_RING PRY zf-ANAPC11 DUF5082 U-box zf-Nse
Other DBs
NCBI-GeneID: 432613
NCBI-ProteinID: NP_001028947
MGI: 3588186
Ensembl: ENSMUSG00000070332
UniProt: Q3V061
Position
11:115331371..115339094
AA seq 624 aa
MKQRPQRKERRRQSSVHRATKYLALMDMQKISRSAQDKPPSQLSSQPSRTPLHLLMGSNS
SQHMLEDQVLCPICLEVFCNPVTTACGHNFCMTCLQNFWDHQAAIGETYYCPQCREAFSS
RPRLCKNVILGEMVACFTQAKSQTSGSLWGLAGPTDVPCDFCSPQKLRAAKSCLQCVASL
CEKHLRSHFEDQLFQDHQLLDPVWDLTNRLCRKHRKLRQLYCRTEGSCVCGACLLEEHKN
HDTTPLEDERARKEVEVRKIQANVENQMLIIASDSQKHQGRVSFLSKLIQTMRDEVDTCF
SEILHEIKQLQMKVLDFVEKEEAAALGKLGNSIQQSHNRLLKLEGDSVWLHSLLANRSDE
QFLQEFPKLKHFPACVEPLLGTNCEETQSFLQLPETLSQLRIRLMDIGLSFINQLLLKGI
RMSSYEVLPGTVERKTLLQNYCNLNFDPCTASEELFLFKETHSVLNLGILLEPSTTNSPL
PGFKQWPQVLCCPGLSEGCHYWEAEVSNSWMCLGVTYRRSPPLSGRPRRNIVYLLGRNPY
SWCLEWDSLKFSVWHNNTQTVLHGSYHHTLGVALDFRTGCLSFYSVAGDVNLLYRFLTSF
LEPLYPAVMVSSGASLTLKQYPEA
NT seq 1875 nt   +upstreamnt  +downstreamnt
atgaaacagcggccacagagaaaggagagaagacggcaatcatcggtccacagggcaaca
aaatatctggctctcatggacatgcagaagatctcaagatcagcccaggacaaacccccc
tcacagctctcttcccagccctccagaaccccgctccatctcctgatgggcagcaacagc
agtcagcacatgttggaagaccaagtcctctgtcccatttgcctggaggtgttctgcaac
ccagtcactaccgcctgcggccataacttctgtatgacttgccttcagaatttctgggac
caccaggctgccattggagagacttactattgcccccagtgcagagaggccttctccagc
aggccccgcctctgcaagaacgtcatcctcggggagatggtggcttgcttcacccaggcc
aagagccagacctcagggtccttgtggggcctggctggccccacagatgtgccctgtgac
ttttgctctccgcagaagctgagggcagccaagtcatgcctgcagtgtgtggcttccttg
tgtgagaaacatctgcgcagccactttgaggaccagctgttccaggaccaccagctgttg
gacccagtgtgggacctcacgaaccgcttgtgccgcaagcatcgcaagctccggcagctg
tattgccgcacggagggcagctgcgtgtgcggagcctgcctattggaggagcacaagaac
catgacaccacccccctggaggatgaacgggcccgcaaagaggtggaagttcggaagatt
caggccaatgtggagaaccagatgctgatcattgcctctgacagtcagaaacaccaggga
cgagtgagttttctctcgaaactgattcagaccatgcgagacgaggtggacacctgcttc
tcagagatcctccatgagattaaacagctgcagatgaaggtcttggattttgtggagaag
gaggaggcggccgccctaggaaagctgggcaactctatccagcaaagccacaaccggctg
ctcaagttggagggggacagcgtctggctccacagcctgctcgccaacaggagtgatgag
caattcctacaggagttccccaaactgaagcacttccctgcctgcgtggaacccttgcta
ggcaccaactgtgaggagacacagagcttccttcagctgccagagaccctgtcgcagctc
cggatcaggctgatggacatagggcttagctttatcaaccagcttctcttgaagggaatc
aggatgagctcctatgaggtgctgcccggaactgtggagagaaagacactgctccagaat
tactgcaacctgaactttgacccctgcacggccagcgaagagctgttcttgttcaaggaa
acacactcggtgttgaacttgggcatccttctggagccctcgaccaccaacagcccgtta
ccgggcttcaagcagtggccccaggttctgtgctgcccaggcctgtccgaaggctgtcac
tactgggaggctgaggtgtccaactcgtggatgtgcctgggagtcacctaccgtcgcagc
cctccgctgagcggtcgcccccgtcgcaacatcgtctacctgctgggccgcaacccctac
tcatggtgtctggagtgggattcgctcaagttctctgtgtggcacaacaacacacagacg
gtgctacacggatcctaccaccacacgctcggcgtggcgctggacttcaggactggctgc
ctgtccttctacagcgtggcgggcgacgtgaacctcctctaccgcttcctcacctccttc
ctcgaacccctgtaccccgcggtcatggtcagcagtggagcctcgctcacactcaagcag
tatcctgaggcatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (25)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (19)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (7)   
   RefSeq(nuc) (1)   
   GenBank (3)   
   EMBL (3)   
Protein domain (15)   
   Pfam (15)   
All databases (52)   

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