KEGG   Mus musculus (house mouse): 433702
Entry
433702            CDS       T01002                                 
Symbol
Ncbp1, CBP80
Name
(RefSeq) nuclear cap-binding protein subunit 1 isoform 1
  KO
K12882  nuclear cap-binding protein subunit 1
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu03013  Nucleocytoplasmic transport
mmu03015  mRNA surveillance pathway
mmu03040  Spliceosome
mmu05014  Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    433702 (Ncbp1)
  09122 Translation
   03013 Nucleocytoplasmic transport
    433702 (Ncbp1)
   03015 mRNA surveillance pathway
    433702 (Ncbp1)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    433702 (Ncbp1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mmu03019]
    433702 (Ncbp1)
   03041 Spliceosome [BR:mmu03041]
    433702 (Ncbp1)
Messenger RNA biogenesis [BR:mmu03019]
 Eukaryotic type
  mRNA processing factors
   5' end processing
    Cap binding complex
     433702 (Ncbp1)
Spliceosome [BR:mmu03041]
 Common components
  Common spliceosomal components
   Cap binding complex
    433702 (Ncbp1)
SSDB
Motif
Pfam: MIF4G_like_2 MIF4G MIF4G_like DUF1690 Cob_adeno_trans
Other DBs
NCBI-GeneID: 433702
NCBI-ProteinID: NP_001028373
MGI: 1891840
Ensembl: ENSMUSG00000028330
UniProt: Q3UYV9
Structure
Position
4:46138732..46172403
AA seq 790 aa
MSRRRHSYENDGGQPHKRRKTSDANETEDHLESLICKVGEKSACSLESNLEGLAGVLEAD
LPNYKSKILRLLCTVARLLPEKLTIYTTLVGLLNARNYNFGGEFVEAMIRQLKESLKANN
YNEAVYLVRFLSDLVNCHVIAAPSMVAMFENFVSVTQEEDVPQVRRDWYVYAFLSSLPWV
GKELYEKKDAEMDRIFSTTESYLKRRQKTHVPMLQVWTADKPHPQEEYLDCLWAQIQKLK
KDRWQERHILRPYLAFDSILCEALQHNLPPFTPPPHTEDSVYPMPRVIFRMFDYTDDPEG
PVMPGSHSVERFVIEENLHCIIKSYWKERKTCAAQLVSYPGKNKIPLNYHIVEVIFAELF
QLPAPPHIDVMYTTLLIELCKLQPGSLPQVLAQATEMLYMRLDTMSTTCVDRFINWFSHH
LSNFQFRWSWEDWSDCLTQDLESPKPKFVREVLEKCMRLSYHQHILDIVPPTFSALCPAN
PTCIYKYGDESSNSLPGHSVALCLSVAFKSKATNDEIFSILKDVPNPNQVDDDDEGFRFN
PLKIEVFVQTLLHLAAKSFSHSFSALAKFHEVFKTLAESDKGKLHVLRVMFEVWRNHPQM
IAVLVDKMIRTQIVDCAAVANWIFSSELSRDFTRLFVWEILHSTIRKMNKHVLKIQKELE
EAKEKLARQHKRRSDDDDRSSDRKDGALEEQIERLQEKVEAAQSEQKNLFLVIFQRFIMI
LTEHLVRCETDGTSILTPWYKNCIERLQQIFLQHHQTIQQYMVTLENLLFTAELDPHILA
VFQQFCALQA
NT seq 2373 nt   +upstreamnt  +downstreamnt
atgtcgcggaggcggcacagctacgagaacgatggtggacaacctcacaaaaggaggaag
acgtctgatgcaaatgaaactgaagatcatttggaatctttaatatgcaaagtaggggaa
aagagtgcctgttctttagagagcaatctcgaaggcctggctggtgttttagaagctgat
cttcctaactacaagagcaagatcttaaggctcctttgtacagttgcacgtctgttacct
gagaagctaacaatttacacaacattagttggactgctgaatgccaggaattacaacttt
ggaggagaatttgtagaagctatgattcgtcaacttaaagaatcactaaaagcaaataac
tataatgaagctgtatatttggtccgttttctgtctgatcttgtgaattgtcatgtgatc
gctgccccgtctatggttgctatgtttgagaattttgtaagtgtaactcaggaagaagat
gtgcctcaagtgcgacgggattggtatgtgtatgcgtttctgtcatccttgccctgggtt
ggaaaggagttgtatgaaaaaaaagatgcagaaatggaccgaatcttctccaccactgaa
agctatctcaaaagacgccagaagactcacgtgcccatgttacaagtctggactgccgac
aaaccacatccacaggaagagtatttagattgcctgtgggcccagattcagaaattgaaa
aaagaccggtggcaggagaggcacatcctaagaccctaccttgcctttgacagcatcctc
tgtgaagctctgcagcacaacctgcctcctttcacaccgccgccccacacagaggactcc
gtgtacccgatgcccagggtcatcttcaggatgtttgactacacagacgacccagaaggc
cctgttatgccagggagccattcggtggagaggtttgtcatcgaggagaatcttcactgc
atcatcaagtcctactggaaggaaaggaagacttgcgctgcccagctggtgagctatcca
gggaagaacaagatccccttgaactaccacatagtggaggtgatctttgcagagctgttt
cagcttccagcgcctcctcacattgacgtgatgtacactacactgctaatcgaactgtgc
aaacttcagccgggctcgctgccccaagtgcttgcgcaggcgactgagatgctgtacatg
cgtctggacacgatgagtaccacgtgtgttgacaggtttattaattggttttctcatcat
ctaagtaattttcaattccgttggagctgggaagattggtcagattgtcttactcaggat
cttgaaagtcccaaaccaaagtttgtaagggaagttctagagaagtgcatgaggttgtct
taccatcaacatatattagatattgttcctcccaccttctcagctctgtgtcctgcaaac
ccaacctgcatttacaagtatggagatgaaagtagcaattctcttcctggacattccgtg
gcactctgtttatctgttgcttttaaaagtaaggcaaccaacgatgagatcttcagcatt
ctgaaggacgtaccaaaccctaaccaggttgatgatgatgatgaagggttcagatttaac
cctttgaaaatagaggtctttgtccagactctgctgcacttagctgccaagtccttcagt
cactccttcagtgctcttgcaaagtttcatgaagtcttcaaaactctggcggagagtgat
aaggggaagctgcacgtgctgagagtcatgtttgaagtgtggaggaaccatccacagatg
attgctgtgctggttgataagatgattcgtacgcagattgtcgactgtgcagcagtagca
aactggatcttctcatcggagctgtctcgggactttacgaggttgtttgtgtgggaaatt
ttgcactctacaattcgtaagatgaacaaacatgttctgaagatccagaaagagctagaa
gaagctaaagagaaactggcgaggcagcacaaacgacgcagtgatgacgacgacaggagc
agtgacaggaaggacggtgccctggaggagcaaatagaaaggctgcaggagaaggtggag
gctgctcagagtgagcagaagaacctcttcctcgtcatcttccagcgtttcatcatgatc
ttgaccgagcacttggtacgatgtgaaacggatgggaccagtatattgaccccgtggtat
aagaactgcatagagaggctgcagcagatcttcctacagcatcaccagaccatccagcag
tacatggtgaccctggagaacctgctcttcacggccgagttagaccctcacatcctggct
gtgttccagcaattctgtgctctgcaggcctaa

  All links  
Gene (18)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (1)   
   OC (1)   
Protein sequence (6)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (4)   
DNA sequence (22)   
   RefSeq(nuc) (4)   
   GenBank (9)   
   EMBL (9)   
3D Structure (2)   
   PDB (2)   
Protein domain (5)   
   Pfam (5)   
All databases (53)   

Download RDF
DBGET integrated database retrieval system