KEGG   Mus musculus (house mouse): 54006
Entry
54006             CDS       T01002                                 
Symbol
Deaf1, C230009B13Rik, NUDR
Name
(RefSeq) DEAF1, transcription factor
  KO
K23041  deformed epidermal autoregulatory factor 1
Organism
mmu  Mus musculus (house mouse)
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:mmu03000]
    54006 (Deaf1)
   03019 Messenger RNA biogenesis [BR:mmu03019]
    54006 (Deaf1)
Transcription factors [BR:mmu03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   SAND domain-containing proteins
    54006 (Deaf1)
Messenger RNA biogenesis [BR:mmu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     54006 (Deaf1)
SSDB
Motif
Pfam: SAND zf-MYND DUF5649
Other DBs
NCBI-GeneID: 54006
NCBI-ProteinID: NP_058570
MGI: 1858496
Ensembl: ENSMUSG00000058886
UniProt: Q9Z1T5
Structure
Position
7:complement(140877089..140918758)
AA seq 566 aa
MEDSDSAAKQLGLAEAAAVAAAAAVAAAAAAAAESEAEEPVLSRDEDSEEDADSEAERET
RRVTAVAVMAAESGHMDMGTEALPSPDEAAAAAAAFAEVTTVTVANVGSSADNVFTTSVA
NAASISGHVLSGRTALQIGDSLNTEKATLIVVHTDGSIVETTGLKGPAAPLTPGPQSPPT
PLAPGQEKGGTKYNWDPSVYDSELPVRCRNISGTLYKSRLGSGGRGRCIKQGENWYSPTE
FEAMAGRASSKDWKRSIRYAGRPLQCLIQDGILNPHAASCTCAACCDDMTLSGPVRLFVP
YKRRKKENELPTTPVKKDSPKNITLLPATAATTFTVTPSGQITTSGALTFDRASTVEATA
VISESPAQGDVFAGATVQEAGVQPPCRVGHPEPHYPGYQDSCQIAPFPEAALPTSHPKIV
LTSLPALAVPPSTPTKAVSPTVVSGLEMSEHRSWLYLEEMVNSLLNTAQQLKTLFEQAKQ
ASSCREAAVTQARMQVDTERKEQSCVNCGREAMSECTGCHKVNYCSTFCQRKDWKDHQHV
CGQSASVTVQADDVHVEESVIEKVAV
NT seq 1701 nt   +upstreamnt  +downstreamnt
atggaggactcggactcggcggcaaaacagctgggcctggccgaggcggcagctgtggcg
gccgctgccgcggtggcggcggccgccgcggccgcagcggaaagcgaggcggaggagccg
gtgttaagcagagacgaggactcggaggaggacgcagactccgaggcggagcgcgagacg
cggcgggtcaccgctgtggcggtgatggcggccgaatctgggcacatggatatgggtacc
gaggctctgcccagccccgatgaggccgccgccgccgccgccgccttcgcagaagtgacc
acagtgactgtggccaacgtggggtcctctgcagataacgtcttcacaacatcagtggca
aacgcagcatcgatatcaggacatgtcctgtctggtaggacagccctgcagatcggtgac
agcctgaacactgaaaaagccacactaatagttgtacacacagatgggagcattgtggag
accactgggctgaagggcccagcagcacctctcactccaggtccccagtctcctcctacc
ccactggcacctggccaggagaaaggtggtaccaagtacaactgggacccttcggtgtat
gacagcgagttgcctgtgcgctgtcggaacatcagtggcacgctctacaagagtaggctc
ggctcaggtggccggggccggtgtatcaagcagggagaaaactggtacagcccaactgag
tttgaagctatggcaggaagagccagcagcaaggactggaagagaagcatccgctatgct
ggcagacccctgcagtgcctcattcaggatggtattttgaaccctcacgctgcctcctgt
acctgtgccgcctgttgtgatgacatgactctgagtggccctgtcaggctcttcgtccct
tataaaaggcgcaagaaagagaatgagctgcccacaactccagtgaagaaggattccccc
aagaacatcaccctgcttcctgccacggcggccaccaccttcactgtgacaccctcagga
cagatcactacctctggagcactgacctttgacagagcatccactgtagaggccactgct
gtcatctctgagagcccagcccaaggtgatgtctttgcaggagccacagtgcaagaggca
ggtgtgcagcctccctgcagggttggccaccctgaaccccactaccctggctatcaggac
agctgccagattgccccgtttccagaagctgcattgccaacatcacaccccaaaattgtc
ctgacatcgctgcccgcattggccgtgccaccgtccacccccaccaaagctgtctctccc
accgtggtcagtgggctggagatgtcagaacatcggagctggctgtacctggaagagatg
gtcaactccctactcaacacagctcagcagctgaagacgctgtttgaacaagccaagcag
gcgagctcttgcagggaagctgctgtgacccaggcgagaatgcaggttgatacagagagg
aaagagcagtcatgtgtcaactgcggccgggaggccatgagtgagtgtaccggctgccac
aaggttaactactgctctacgttctgccagcgcaaggactggaaagaccatcagcatgtg
tgtggccagtcagcgtctgtcactgtccaggctgatgacgtccatgttgaagaaagtgtg
atagaaaaagttgctgtttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (2)   
   OC (1)   
Protein sequence (20)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (18)   
DNA sequence (59)   
   RefSeq(nuc) (21)   
   GenBank (19)   
   EMBL (19)   
3D Structure (1)   
   PDB (1)   
Protein domain (3)   
   Pfam (3)   
All databases (100)   

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