KEGG   Mus musculus (mouse): 55994Help
Entry
55994             CDS       T01002                                 

Gene name
Smad9, MADH6, Madh8, Madh9, Smad8
Definition
(RefSeq) SMAD family member 9
  KO
K16791  mothers against decapentaplegic homolog 9
Organism
mmu  Mus musculus (mouse)
Pathway
mmu04350  TGF-beta signaling pathway
mmu04550  Signaling pathways regulating pluripotency of stem cells
Module
mmu_M00679  BMP signaling
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04350 TGF-beta signaling pathway
    55994 (Smad9)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04550 Signaling pathways regulating pluripotency of stem cells
    55994 (Smad9)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: MH2 MH1 IRF-3 DUF4223
Motif
Other DBs
NCBI-GeneID: 55994
NCBI-ProteinID: NP_062356
MGI: 1859993
Ensembl: ENSMUSG00000027796
Vega: OTTMUSG00000021206
UniProt: Q9JIW5 Q3UVC6
Position
3; 3 C
AA seq 430 aa AA seqDB search
MHPSTPISSLFSFTSPAVKRLLGWKQGDEEEKWAEKAVDSLVKKLKKKKGAMDELERALS
CPGQPSKCVTIPRSLDGRLQVSHRKGLPHVIYCRVWRWPDLQSHHELKPLECCEFPFGSK
QKEVCINPYHYRRVETPVLPPVLVPRHSEYNPQLSLLAKFRSASLHSEPLMPHNATYPDS
FQQSLCPAPPSSPGHVFPQSPCPTSYPHSPGSPSESDSPYQHSDFRPVCYEEPQHWCSVA
YYELNNRVGETFQASSRSVLIDGFTDPSNNRNRFCLGLLSNVNRNSTIENTRRHIGKGVH
LYYVGGEVYAECVSDSSIFVQSRNCNYQHGFHPATVCKIPSGCSLKVFNNQLFAQLLAQS
VHHGFEVVYELTKMCTIRMSFVKGWGAEYHRQDVTSTPCWIEIHLHGPLQWLDKVLTQMG
SPHNPISSVS
NT seq 1293 nt NT seq  +upstreamnt  +downstreamnt
atgcaccccagcacccccatcagctccctcttctccttcaccagccccgcagtgaagcgg
ctgctgggctggaagcagggagatgaagaggagaagtgggcagagaaggcggtggactct
ttggtgaagaagttaaagaagaagaaaggcgccatggatgaactggagagggcgctgagc
tgcccgggtcagcctagcaagtgtgtcaccatcccacggtccctcgatggacgcctccag
gtgtcccaccgaaaggggctgccccacgtcatctactgccgcgtgtggcgctggccagac
ctgcagtcccatcatgagctgaagcccttggagtgctgtgagttcccgttcggctccaag
cagaaggaggtctgcatcaacccataccattaccgcagagtggagaccccagttctgcct
ccagtgctggtaccaagacacagcgagtacaaccctcagctcagcctcctggccaagttc
cgaagtgcctcgctgcacagcgaacccctcatgccgcacaacgccacctaccctgactct
ttccagcagtctctctgtccggcaccgccctcctcgccaggccatgtgtttccgcagtct
ccatgccccaccagctacccgcactcccccggaagtccttccgagtcagacagtccctat
caacactcagacttccggccagtttgctacgaggaaccccagcactggtgttctgttgcc
tactacgaactaaacaaccgggtcggagagactttccaggcgtcctcgcggagcgtgctc
atagacggcttcaccgacccttccaataacaggaataggttctgccttgggcttctctca
aatgtaaacagaaactcgaccatagaaaacaccaggaggcacattggaaagggtgtgcat
ttgtactacgttgggggcgaggtgtatgcggagtgcgtgagcgacagcagcatctttgtc
cagagccggaactgcaactaccagcacggcttccacccggccaccgtctgcaagatcccc
agcggctgcagcctcaaggtcttcaacaaccagctcttcgcccagctgctcgcccagtcc
gtgcaccacggctttgaagtggtgtatgagctgacgaagatgtgcacgattcggatgagc
tttgtgaagggctggggagcagagtatcatcgccaggatgtcacgagcaccccctgctgg
atcgagatccatcttcatggaccgctgcagtggttggataaggtgctcactcagatgggc
tccccacacaaccctatctcttcagtgtcttaa

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