KEGG   Mus musculus (house mouse): 56070
Entry
56070             CDS       T01002                                 
Symbol
Tcerg1, 2410022J09Rik, 2900090C16Rik, CA150b, FBP23, FBP28, Taf2s, ca150, p144
Name
(RefSeq) transcription elongation regulator 1 (CA150)
  KO
K12824  transcription elongation regulator 1
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    56070 (Tcerg1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:mmu03041]
    56070 (Tcerg1)
Spliceosome [BR:mmu03041]
 Complex A
  U1 snRNP components
   U1 related factors
    56070 (Tcerg1)
 Complex B
    56070 (Tcerg1)
SSDB
Motif
Pfam: FF WW
Other DBs
NCBI-GeneID: 56070
NCBI-ProteinID: NP_001034563
MGI: 1926421
Ensembl: ENSMUSG00000024498
UniProt: Q8CGF7 Q3TH57
Structure
Position
18:42644369..42708850
AA seq 1100 aa
MAERGGDGGEGERFNPGELRMAQQQALRFRGPAPPPNAVMRGPPPLMRPPPPFGMMRGPP
PPPRPPFGRPPFDPNMPPMPPPGGIPPPMGPPHLQRPPFMPPPMGAMPPPPGMMFPPGMP
PGTAPGAPALPPTEEIWVENKTPDGKVYYYNARTRESAWTKPDGVKVIQQSELTPMLAAQ
AQVQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQ
AQAQAQAQAQAQVQAQAVGAPTPTTSSPAPAVSTSTPTSTPSSTTATTTTATSVAQTVST
PTTQDQTPSSAVSVATPTVSVSAPAPTATPVQTVPQPHPQTLPPAVPHSVPQPAAAIPAF
PPVMVPPFRVPLPGMPIPLPGVAMMQIVSCPYVKTVATTKTGVLPGMAPPIVPMIHPQVA
IAASPATLAGATAVSEWTEYKTADGKTYYYNNRTLESTWEKPQELKEKEKLDEKIKEPIK
EASEEPLPMETEEEDPKEEPVKEIKEEPKEEEMTEEEKAAQKAKPVATTPIPGTPWCVVW
TGDERVFFYNPTTRLSMWDRPDDLIGRADVDKIIQEPPHKKGLEDMKKLRHPAPTMLSIQ
KWQFSMSAIKEEQELMEEMNEDEPIKAKKRKRDDNKDIDSEKEAAMEAEIKAARERAIVP
LEARMKQFKDMLLERGVSAFSTWEKELHKIVFDPRYLLLNPKERKQVFDQYVKTRAEEER
REKKNKIMQAKEDFKKMMEEAKFNPRATFSEFAAKHAKDSRFKAIEKMKDREALFNEFVA
AARKKEKEDSKTRGEKIKSDFFELLSNHHLDSQSRWSKVKDKVESDPRYKAVDSSSMRED
LFKQYIEKIAKNLDSEKEKELERQARIEASLREREREVQKARSEQTKEIDREREQHKREE
AIQNFKALLSDMVRSSDVSWSDTRRTLRKDHRWESGSLLEREEKEKLFNEHIEALTKKKR
EHFRQLLDETSAITLTSTWKEVKKIIKEDPRCIKFSSSDRKKQREFEEYIRDKYITAKAD
FRTLLKETKFITYRSKKLIQESDQHLKDVEKILQNDKRYLVLDCVPEERRKLIVAYVDDL
DRRGPPPPPTASEPTRRSTK
NT seq 3303 nt   +upstreamnt  +downstreamnt
atggcggagcgtggcggggacggaggggaaggcgagcggttcaacccgggggagctgagg
atggctcaacagcaggccttgaggttccgaggcccagctcccccaccaaatgccgtgatg
cgaggcccgccacctctcatgagaccacctcctcctttcggcatgatgagaggccctcct
ccaccacccaggcccccctttggacggcctccttttgatcctaatatgccaccaatgcct
cctccaggaggaatacctccacctatgggcccacctcacctacagagaccacctttcatg
cctccacccatgggagctatgcctcctcctccgggtatgatgttcccaccaggaatgcct
ccggggactgctcctggtgctccagcactgcctcccactgaggagatatgggtagaaaat
aaaactccagatgggaaggtttattactacaatgctcggactcgtgaatctgcatggacc
aagccagatggagttaaggttattcagcaatcagaactgacgcccatgcttgcagcccaa
gcacaggttcaggcccaggcccaggcccaggcccaagcacaggctcaggcccaggcccag
gcacaagcccaggctcaggcccaggcccaggcccaggctcaggcacaagcccaggctcag
gcccaggcccaggcccaggctcaggctcaagcccaagcccaagcgcaagcacaagcccag
gcccaagcccaggcccaggctcaggcccaggcacaagtccaagcacaagcagtaggcgct
cccacccctaccaccagtagcccagcacctgcagtgtccacgtcaactccgacatctacc
ccatcctccaccacagctaccacgacaactgctacttcagttgcacagacagtatcaaca
cccacaacacaagaccagaccccaagttctgctgtttcagttgccacacctacagttagt
gtttcagctcctgctcctacagccacacctgtgcaaaccgtaccccagccgcacccacag
acgttacctcctgctgttcctcactcggtacctcagccggcagcagcaatacctgctttc
ccaccagtaatggtgcctccgttccgtgtgcccctgcctggcatgccaatcccacttcca
ggtgtagcaatgatgcaaatagtcagctgcccgtatgtaaagacagtcgctaccaccaag
accggtgtactaccaggaatggcccctcctatagtacccatgatccatccccaggttgct
attgcagcttcacctgctaccctagctggggcaacagcagtttctgagtggactgaatat
aaaacagcagatgggaagacgtactattataataatagaacactagaatccacgtgggag
aagccccaagaactgaaggagaaagaaaaattagatgagaagattaaagaaccaattaag
gaggcctctgaagagccattgccaatggagactgaggaggaagatcctaaggaagagcct
gtgaaggagataaaggaggagcccaaagaagaagagatgactgaagaagaaaaggctgcc
cagaaggcaaagccagtagctactactcctattcctggtactccatggtgtgttgtttgg
actggtgatgagagggtcttcttttacaatcccaccacccgcctttctatgtgggaccgg
cctgatgatttgattggaagggcggatgttgacaaaattattcaagagccccctcataag
aaaggattggaagacatgaagaagctaaggcacccggctccgacaatgctgtccatccaa
aagtggcagttctcaatgagcgcaattaaagaagaacaagagttaatggaagaaatgaat
gaagatgagcctattaaagcaaaaaagcggaagagagatgataataaagacattgattca
gagaaagaagctgccatggaagctgaaattaaagctgcccgagaaagggccattgtccct
ctggaggctcgaatgaagcagttcaaggacatgctgctagagagaggggtgtctgctttt
tcaacatgggagaaagagttgcacaagatagtatttgaccctcggtacttgcttctcaat
cctaaagaaagaaaacaggtgtttgatcagtatgtcaagaccagagcagaggaagaacgc
agggaaaagaaaaacaaaataatgcaagccaaggaagatttcaaaaaaatgatggaagaa
gcaaagtttaatccaagagctacttttagtgaatttgctgccaaacatgctaaagattca
agattcaaagcaattgaaaagatgaaagatagagaagcattgtttaatgagtttgtggca
gctgcaaggaagaaagaaaaagaagattcgaagacgagaggggagaagattaaatcagat
ttctttgaactgttatctaatcatcacttggatagtcaatctcgatggagcaaagtaaaa
gacaaagtagaaagtgacccccgatataaagcggtggatagttcatcaatgagagaagac
cttttcaaacagtacatcgagaaaatagccaagaatttagactcagaaaaagaaaaagag
ctggagaggcaagcccgcattgaggcaagccttcgagaacgggaaagagaagttcagaag
gcgcgctctgagcagacgaaagagatcgatcgggagagagagcagcacaaacgggaggag
gctatccagaacttcaaggctcttctgtctgacatggtacgttcttcagatgtgtcctgg
tctgatactaggaggaccctccggaaagaccaccgctgggaatctgggtccttattggaa
agagaggagaaagagaaactttttaatgaacatattgaagcgcttaccaaaaagaaaagg
gagcactttaggcagcttctggacgaaacctctgcgattaccttaacatccacgtggaaa
gaagtgaaaaaaataattaaggaagatcctcggtgcattaagttctcctccagtgacagg
aaaaaacaaagggagtttgaagaatacatcagagacaaatacatcactgccaaagctgac
ttcaggacacttttgaaagagaccaaattcattacatacagatccaaaaagttaatccaa
gaatctgatcagcacctgaaagatgtagaaaagattttgcagaatgacaaacggtatcta
gtactggactgtgtccccgaggagaggaggaaactaattgtggcctatgttgatgacctg
gatcgccgaggtccacccccacctcccacagcatcagagcccactagacgatcaacaaaa
taa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (31)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (24)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (1)   
   OC (1)   
Protein sequence (11)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (8)   
DNA sequence (47)   
   RefSeq(nuc) (17)   
   GenBank (15)   
   EMBL (15)   
3D Structure (5)   
   PDB (5)   
Protein domain (2)   
   Pfam (2)   
All databases (100)   

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