KEGG   Mus musculus (house mouse): 56418
Entry
56418             CDS       T01002                                 
Symbol
Ykt6, 0610042I15Rik, 1810013M05Rik
Name
(RefSeq) YKT6 v-SNARE homolog (S. cerevisiae)
  KO
K08516  synaptobrevin homolog YKT6
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu04130  SNARE interactions in vesicular transport
mmu04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04130 SNARE interactions in vesicular transport
    56418 (Ykt6)
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    56418 (Ykt6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:mmu04131]
    56418 (Ykt6)
Membrane trafficking [BR:mmu04131]
 SNARE
  VAMP, Ykt6, Sec22 (R)
   Ykt6
    56418 (Ykt6)
SSDB
Motif
Pfam: Longin Synaptobrevin
Other DBs
NCBI-GeneID: 56418
NCBI-ProteinID: NP_062635
MGI: 1927550
Ensembl: ENSMUSG00000002741
UniProt: Q9CQW1
Position
11:5905779..5917780
AA seq 198 aa
MKLYSLSVLYKGDPKAVLLKAAYDVSSFSFFQRSSVQEFMTFTSQLIVERSGKGSRASVK
EQEYLCHVYVRSDSLAGVVIADSEYPSRVAFTLLEKVLDEFSKQVDRIDWPVGSPATIQY
TGLDDHLSKYQNPREADPMSKVQAELDETKIILHNTMESLLERGEKLDDLVSKSEVLGTQ
SKAFYKTARKQNSCCAIM
NT seq 597 nt   +upstreamnt  +downstreamnt
atgaagctgtacagccttagtgtcctttacaaaggcgatccgaaagcggtgctgctcaag
gccgcgtacgacgtgtcttcctttagtttcttccagaggtccagtgtgcaggaattcatg
acctttacaagtcaactgattgtggaacgctcggggaaaggcagcagagcttctgtcaaa
gaacaagagtatctttgccatgtctacgtccggagcgacagtctggcaggtgtggtcatt
gctgacagcgaatacccttccagagtggccttcaccttgctggagaaggtactagatgaa
ttctccaagcaggtggatagaatagactggccagtaggatccccggctacaatccagtac
acaggcctggacgatcaccttagtaaataccagaacccccgagaagctgatcccatgagt
aaagtgcaggccgaactggacgagaccaaaatcattctgcacaacaccatggagtctttg
ttagagcgaggcgagaagcttgatgacctggtatccaagtcagaagtgctgggaacacag
tcgaaagccttctataaaactgcccggaaacaaaactcttgctgtgcaatcatgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (23)   
   RefSeq(nuc) (1)   
   GenBank (11)   
   EMBL (11)   
Protein domain (2)   
   Pfam (2)   
All databases (43)   

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