KEGG   Mus musculus (house mouse): 66055
Entry
66055             CDS       T01002                                 
Symbol
Sf3b6, 0610009D07Rik, 6030419K15Rik, Sf3b14
Name
(RefSeq) splicing factor 3B subunit 6
  KO
K12833  pre-mRNA branch site protein p14
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    66055 (Sf3b6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:mmu03041]
    66055 (Sf3b6)
Spliceosome [BR:mmu03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    66055 (Sf3b6)
 Complex B
    66055 (Sf3b6)
 Complex C
   U2 SnRNP specific factors
    66055 (Sf3b6)
SSDB
Motif
Pfam: RRM_1 RRM_5 RRM_MUD2_C RRM_ACIN1 RRM_SRRT RRM_7 DUF8400
Other DBs
NCBI-GeneID: 66055
NCBI-ProteinID: NP_079599
MGI: 1913305
Ensembl: ENSMUSG00000037361
UniProt: P59708
Position
12:4867608..4877659
AA seq 125 aa
MAMQAAKRANIRLPPEVNRILYIRNLPYKITAEEMYDIFGKYGPIRQIRVGNTPETRGTA
YVVYEDIFDAKNACDHLSGFNVCNRYLVVLYYNANRAFQKMDTKKKEEQLKLLKEKYGIN
TDPPK
NT seq 378 nt   +upstreamnt  +downstreamnt
atggcgatgcaagcggctaagagggcgaatattcgcctcccacctgaagtaaatcggatt
ttgtatataaggaatttgccatacaaaatcacagcagaagaaatgtatgatatatttggg
aaatatggacctattcgtcaaatcagagtagggaatacacctgaaaccagaggaacagcc
tatgtggtctatgaggacatctttgatgctaagaatgcctgcgaccacctatcaggattc
aacgtttgtaacagataccttgtggttttgtattacaatgctaaccgggcatttcagaag
atggacaccaagaagaaggaggagcagctgaaacttctcaaggaaaagtatggcatcaac
acagatcctcccaagtga

  All links  
Gene (27)   
   RefGene (22)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (13)   
   RefSeq(nuc) (1)   
   GenBank (6)   
   EMBL (6)   
Protein domain (7)   
   Pfam (7)   
All databases (50)   

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