KEGG   Mus musculus (house mouse): 665155
Entry
665155            CDS       T01002                                 
Symbol
Srp54b
Name
(RefSeq) signal recognition particle 54B
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu03060  Protein export
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    665155 (Srp54b)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:mmu02044]
    665155 (Srp54b)
Enzymes [BR:mmu01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     665155 (Srp54b)
Secretion system [BR:mmu02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   665155 (Srp54b)
  Eukaryotic Sec-SRP protein
   665155 (Srp54b)
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N cobW CbiA nSTAND3 DUF2209 AAA_33 AAA_17 SRPRB ResIII AAA_22 MeaB AAA_30 APS_kinase AAA_19 MobB AAA_16 MMR_HSR1 6PF2K PduV-EutP Zeta_toxin ATP_bind_1 Thymidylate_kin AAA AAA_18 AAA_31 Torsin ArsA_ATPase
Other DBs
NCBI-GeneID: 665155
NCBI-ProteinID: NP_001093579
MGI: 3714357
Ensembl: ENSMUSG00000112449
UniProt: P14576
Structure
Position
12:55201889..55235998
AA seq 504 aa
MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCTALLEADVNIKLVKQLRENVKSAI
DLEEMASGLNKRKMIQHAVFKELVKLVDPGVKAWTPTKGKQNVIMFVGLQGSGKTTTCSK
LAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGVEKFK
NENFEIIIVDTSGRHKQEDSLFEEMLQVSNAIQPDNIVYVMDASIGQACEAQAKAFKDKV
DVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLLGMGDI
EGLIDKVNELKLDDNEALIEKLKHGQFTLRDMYEQFQNIMKMGPFSQILGMIPGFGTDFM
SKGNEQESMARLKKLMTIMDSMNDQELDSTDGAKVFSKQPGRIQRVARGSGVSTRDVQEL
LTQYTKFAQMVKKMGGIKGLFKGGDMSKNVSQSQMAKLNQQMAKMMDPRVLHHMGGMAGL
QSMMRQFQQGAAGNMKGMMGFNNM
NT seq 1515 nt   +upstreamnt  +downstreamnt
atggttctagcagatcttggaagaaaaataacatcagcattacgctcattgagcaatgcc
accattatcaatgaagaggtattaaatgctatgctgaaagaagtatgtacagcattattg
gaagcagatgttaatattaaactagtgaagcaactcagagaaaatgttaagtctgcaatt
gatcttgaagagatggcatctggactgaacaaaagaaaaatgattcagcatgctgtattt
aaagaacttgtaaagcttgtagaccctggagttaaagcgtggacaccgactaagggaaag
caaaatgtgatcatgtttgttggattgcaagggagtggtaaaacgacaacatgttcaaag
ttagcatattattaccagaggaaaggttggaagacctgtttgatatgtgcagatacattc
agagcaggagcctttgaccagctaaaacagaatgccaccaaagcaagaattccgttctat
ggcagctatactgaaatggatcctgtcatcattgcttctgaaggagtggagaaattcaaa
aatgaaaattttgaaattattattgttgatacaagtggtcgtcacaaacaagaagactct
ttatttgaagaaatgcttcaagtttctaatgctatacaacctgataacattgtttatgtg
atggatgcatccatcggacaggcttgtgaggcccaggcgaaggcctttaaagacaaagta
gatgtagcttcagtaatagtgacaaaactcgacggtcatgcgaaaggaggcggtgctctt
agtgcagttgctgccacaaaaagtccaattattttcattggtacaggggaacatatagat
gattttgaacctttcaaaacacaacctttcatcagcaaactccttggaatgggtgatatt
gaaggactgattgataaagtcaatgaattgaagttggatgataatgaggcacttatagag
aagttgaagcacggtcagtttacattgcgagacatgtatgaacagtttcagaatattatg
aaaatgggcccattcagtcagatattggggatgattcctggctttggcacagattttatg
agcaaagggaatgagcaggagtcaatggcaaggctgaagaaactgatgacaatcatggac
agtatgaacgatcaagaactggacagtacagatggtgccaaggttttcagtaagcaacca
gggagaatccaaagagttgcccggggatcaggtgtgtcaacaagagatgttcaagaactt
ctgacccagtataccaagtttgcacagatggtcaaaaagatgggaggtatcaaaggactt
ttcaaaggcggtgatatgtctaagaatgtgagtcagtcacagatggcaaaattaaaccaa
caaatggccaaaatgatggacccacgagttcttcatcacatgggtggcatggccggcctt
cagtcaatgatgcggcagtttcagcagggtgctgctggcaacatgaaaggcatgatggga
ttcaataacatgtaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (2)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (7)   
   RefSeq(nuc) (1)   
   GenBank (3)   
   EMBL (3)   
3D Structure (2)   
   PDB (2)   
Protein domain (29)   
   Pfam (29)   
All databases (67)   

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