| Entry |
|
|---|
| Gene name |
Rpa1, 5031405K23Rik, 70kD, 70kDa, AA589576, AW557552, R, RF, RF-A, RP-A, Rpa
|
|---|
| Definition |
(RefSeq) replication protein A1
|
|---|
| KO |
|
|---|
| Organism |
|
|---|
| Pathway |
|
|---|
| Brite |
KEGG Orthology (KO) [BR:mmu00001]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
68275 (Rpa1)
03420 Nucleotide excision repair
68275 (Rpa1)
03430 Mismatch repair
68275 (Rpa1)
03440 Homologous recombination
68275 (Rpa1)
03460 Fanconi anemia pathway
68275 (Rpa1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:mmu03000]
68275 (Rpa1)
03032 DNA replication proteins [BR:mmu03032]
68275 (Rpa1)
03400 DNA repair and recombination proteins [BR:mmu03400]
68275 (Rpa1)
Transcription factors [BR:mmu03000]
Eukaryotic type
Zinc finger
Cys2His2 others
68275 (Rpa1)
DNA replication proteins [BR:mmu03032]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
68275 (Rpa1)
DNA repair and recombination proteins [BR:mmu03400]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
68275 (Rpa1)
MMR (mismatch excision repair)
68275 (Rpa1)
DSBR (double strand breaks repair)
HR (homologous recombination)
68275 (Rpa1)
|
|---|
| SSDB |
|
|---|
| Motif |
|
|---|
| Other DBs |
|
|---|
| Position |
11 B5; 11 45.79 cM
|
|---|
| AA seq |
623 aa
MVGHLSEGAIEVMIQQENTSIKPILQVINIRPISTGNRSPRYRLLMSDGLNTLSSFMLAT
QLNTLVEGGQLASNCVCQVHKFIVNTLKDGRKVVVLMDLEVMKSAEDVGLKIGNPVPYNE
GYGQQQQQQQQQQQQAVPSPASAATPPASKPQPQNGSLGMGSTAAKAYGASKPFGKPAGT
GLLQPSGGTQSKVVPIASLTPYQSKWTICARVTNKSQIRTWSNSRGEGKLFSLELVDESG
EIRATAFNEQVDKFFPLIEVNKVYYFSKGALKIANKQFSAVKNDYEMTFNNETSVLPCED
GHHLPTVQFDFTGIGDLESKAKDALVDIIGICKSYEDSIKITVKSNNREVAKRNIYLMDM
SGKVVTTTLWGEDADKFDGSRQPVMAIKGARVSDFGGRSLSVLSSSTVIVNPDIPEAYKL
RGWFDSEGQALDGVSISDHRSGGAGGGNTNWKTLHEAKSENLGQGDKADYFSTVAAVVFL
RKENCMYQACPTQDCNKKVIDQQNGLYRCEKCDREFPNFKYRMILSANIADFQENQWVTC
FQESAEAILGQNTMYLGELKEKNEQAFEEVFQNANFRSFTFRIRVKLETYNDESRIKATV
MDVKPVDFRDYGRRLIANIRKNM |
|---|
| NT seq |
1872 nt +upstreamnt +downstreamnt
atggtgggacacctgagcgagggggccatcgaggtcatgatacagcaggaaaatacatcc
ataaagcccatcctgcaggtcattaacatccgtcccatttctacagggaataggtcaccc
cggtaccgactgctcatgagtgatgggttgaacacgctttcctcgttcatgctggccacg
cagctgaacaccctggtcgagggagggcagctggccagcaactgtgtctgccaggtccac
aagttcatcgtcaacaccctgaaagacggcaggaaagtagttgttttgatggacttggaa
gttatgaaatctgctgaagacgttggattaaagattgggaatccagtgccctataatgaa
ggatatgggcagcagcagcagcagcagcagcagcagcagcagcaagcagtcccttcccca
gcctctgcagcgacaccaccagccagcaagccccagccacagaatgggagtctgggaatg
ggttccactgcagctaaggcttatggtgcctcaaagccatttggaaaacctgccggaact
ggcctgctgcagccttcaggtgggacacagtccaaagtggtgcccatcgccagcctcacc
ccgtaccagtccaagtggactatttgtgcccgtgtcaccaacaaaagtcagatccgcacc
tggagtaattcccggggggaaggaaagcttttctctctagaacttgtggatgaaagcggt
gaaatcagagctactgctttcaatgagcaagtggacaagttctttccccttattgaagtg
aacaaggtgtattacttctcaaagggcgccctgaagatcgctaacaaacagttctccgct
gttaaaaatgactatgagatgaccttcaataatgagacttctgtccttccctgtgaagat
ggccatcacttacccacagttcagtttgatttcacagggatcggtgacctagagagcaag
gctaaagacgcactagtagacatcattggaatctgcaagagctatgaagattcgattaaa
atcacagtgaagtcgaacaacagagaagttgctaagagaaatatctatttgatggacatg
tcagggaaggtggtgaccacaactctgtggggagaagatgctgacaagtttgacggctct
cggcagcccgtgatggccatcaaaggagcccgagtctctgacttcggtggacggagcctc
tcggtcctctcatccagcactgtcattgtgaatcctgacatcccagaggcctataagctt
cgtggctggtttgactcagaaggacaagccttagatggtgtttccatctctgaccacagg
agtggaggggccggagggggcaacaccaactggaaaactttgcatgaggctaaatctgag
aacctgggccagggagacaaggcggactatttcagcactgtggcagcggtggtgtttctc
cgcaaagagaactgtatgtaccaggcctgcccaacccaggactgcaataagaaagtgatt
gaccagcagaatgggttgtaccgctgtgagaagtgtgaccgggaatttcccaatttcaaa
taccgcatgatcttatcggcaaatattgcagattttcaagagaaccagtgggtgacgtgt
ttccaggagtctgcagaggccatccttggacagaacactatgtaccttggggaactcaaa
gagaagaacgagcaggcgtttgaagaggttttccagaatgccaacttccggtcatttacg
ttcagaatcagggtcaagctggagacctacaatgatgaatctcgaattaaggccactgtg
atggacgtgaagcccgtggacttcagagactatggcagacggctgatcgcgaacatcagg
aagaacatgtga |
|---|
