KEGG   Mus musculus (house mouse): 72103
Entry
72103             CDS       T01002                                 
Symbol
Aplf, 2010301N04Rik
Name
(RefSeq) aprataxin and PNKP like factor
  KO
K13295  aprataxin and PNK-like factor [EC:3.1.-.-]
Organism
mmu  Mus musculus (house mouse)
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mmu03400]
    72103 (Aplf)
Enzymes [BR:mmu01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.-
    3.1.-.-
     72103 (Aplf)
DNA repair and recombination proteins [BR:mmu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     72103 (Aplf)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Other NHEJ factors
     72103 (Aplf)
SSDB
Motif
Pfam: zf-CCHH FHA_2 Yop-YscD_cpl FHA ELM2
Other DBs
NCBI-GeneID: 72103
NCBI-ProteinID: NP_001163960
MGI: 1919353
Ensembl: ENSMUSG00000030051
UniProt: Q9D842
Position
6:complement(87605407..87649244)
AA seq 499 aa
MPSDFFLQPLDGGPRVPVGPGQTVIGRGPLLGITDKRVSRRHAILEVVDSQLRIKPIHRN
PCFYQSSEKSQHSPMETQVWSQLHPGDSFSLLLDKYAFRVFSAESEVEMECTLRNSQMLD
EDDILSEMQKSPVVNLPDKTTGASQLQGSPEITKTKCPTIDPMSSSGECRAFSEHQPRPT
QRKRILPAWMLAESLSDQSLSTPAEGGDKDVIQRSGKAGTCEDRTPGNTSWHGKKRLSPS
GNSKSVSAEQDPGKKCRKADQEGPGVSSENVPESSSSNIVKDPDVDIVKTNKQKDGILIE
ELGEVSKHKAATKPTTNEEGESCARVQSKSPPEKSQGCHPESSSAPSSPDALHTDTADPV
LGCSEESKVRRTACMYGANCYRRNPLHFQHFSHPGDSDYGEVHGTDEGVIGDRPECPYGA
SCYRKNPQHKMEYRHSALPARVALDEDDDDVGQPSDDEDEEDYEPTDEDSDWHPGKDDEE
QEDVDELLKEAKSSLHLKH
NT seq 1500 nt   +upstreamnt  +downstreamnt
atgccttcggacttctttctgcagcctctggacggcggtccccgcgtgcccgtggggccg
gggcagactgtgataggccgcgggccgctgctgggaataacagacaaaagagtatccaga
agacatgccattcttgaagtggttgatagtcagcttcgaatcaagccaatccataggaat
ccatgtttctaccagtcctcggagaagagccaacactcgccaatggagacgcaagtgtgg
agccagttgcatcccggggatagcttttccctgttacttgacaagtacgctttccgtgtt
ttctctgcagaatctgaagtggagatggagtgtactctgagaaacagtcagatgcttgat
gaagatgatatattgagtgagatgcagaagtcccctgtggttaacttacctgataagaca
actggtgcctcacagctgcaaggaagccctgaaataaccaagaccaagtgtcccaccata
gatcctatgtcctcttcaggtgaatgcagagctttcagtgagcaccagccacgtcctacc
cagaggaaaagaatcctcccagcttggatgttggcggaaagtctaagtgaccagagcctc
tccacaccagctgaggggggagataaggatgtcatccagaggagtggaaaagcaggaacc
tgtgaagatagaaccccaggaaacacatcatggcatgggaaaaagcggcttagtccatca
ggaaattcaaaaagtgtgtcagcggaacaagaccctgggaagaagtgcagaaaggctgac
caagaaggaccgggtgtttcttctgagaatgttccagaatcatcatcttcaaacatagta
aaggacccagatgtggatattgtgaagacaaataaacagaaggacgggattttaatagag
gaacttggtgaggtctctaaacataaagccgccaccaaaccaaccacaaatgaagagggc
gagagttgtgcacgtgtccaaagcaagtcacctcctgagaaatctcaaggatgccatcct
gagtctagctctgctccctccagtcctgatgctttgcacacagacacagctgacccagtg
ctgggctgttcagaagaaagcaaggtccggaggacggcctgcatgtatggggccaactgc
tacaggaggaaccccctccactttcaacacttcagccaccctggtgacagtgactatgga
gaggtacatggcacagatgaaggtgtgattggtgacaggcccgagtgtccctatggagcg
tcttgttacaggaagaacccccagcacaagatggaatataggcacagtgcacttccagcc
agagttgctctggatgaagatgacgatgatgtcgggcaacccagtgacgatgaggacgag
gaagactatgagccgacagatgaagattctgattggcacccaggaaaggacgatgaggag
caggaagatgtggatgagcttttgaaagaagcaaaaagttctttgcacttgaaacattga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (36)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (28)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (2)   
   OC (1)   
Protein sequence (7)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (5)   
DNA sequence (21)   
   RefSeq(nuc) (5)   
   GenBank (8)   
   EMBL (8)   
Protein domain (5)   
   Pfam (5)   
All databases (73)   

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