KEGG   Mus musculus (house mouse): 72290
Entry
72290             CDS       T01002                                 
Symbol
Lsm11, 2210404M20Rik
Name
(RefSeq) U7 snRNP-specific Sm-like protein LSM11
  KO
K25592  U7 snRNA-associated Sm-like protein LSm11
Organism
mmu  Mus musculus (house mouse)
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mmu03019]
    72290 (Lsm11)
Messenger RNA biogenesis [BR:mmu03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     72290 (Lsm11)
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 72290
NCBI-ProteinID: NP_082461
MGI: 1919540
Ensembl: ENSMUSG00000044847
UniProt: Q8BUV6 Q5SUH5
Position
11:complement(45819096..45835762)
AA seq 361 aa
MEEREWGARSARAGSPASPPSPRLDVSSYSFDPLLALYAPRLPPIPYPNAPCFNNVAEYE
SFLKGGRTGRGRARGTGEPASAGTSTGTSTGAGSSSRARRRAAPTPDPERIQRLRRLMVV
KEDTDGTAGARRQGPGRSKKAPRNVLTRMPLHEGSPLGELHRCIREGVKVNVHIRTFKGL
RGVCTGFLVAFDKFWNMALTDVDETYRKPVLGKAYERDSSLTLTRLFDRLKLQDSSKKEA
DSKSAVEDSTLSRYSQTSTWKVASVWGRGDTDRSSHRRSRSVPSSLQASAREESRSELSG
RTTRTEGSSVGGTFSRATTLSRGQSRKKKRKPKVDYQQVFTRHINQIFIRGENVLLVHLA
Q
NT seq 1086 nt   +upstreamnt  +downstreamnt
atggaggagcgcgagtggggggcgaggtcggctcgcgccggcagcccagccagcccgccc
agcccgcggctggacgtcagctcctacagcttcgacccgctgctggccttgtacgcacct
cgcctgccgcccattccctaccccaacgcgccctgcttcaacaacgtggcggagtacgag
agcttcctgaagggcgggcgcaccgggcgcggtcgggctcggggcacgggggagccggcc
tcggcgggaacctccaccggaacctccacgggagccgggagctcgtccagggcccgtcgc
cgcgccgcgcccaccccggatcccgagcgcatccagcgcctgcgccggctcatggtggtc
aaggaggacacggacggcacggccggagcgcgacgccagggcccggggcgcagcaagaag
gcaccccgcaatgtgcttacgcggatgcctttgcatgaaggtagccctctgggtgaactg
caccgctgcatccgagagggagtcaaggtgaacgttcacatccgcaccttcaagggactc
cgcggtgtctgcactggcttcctcgtcgccttcgacaagttctggaatatggccctcact
gacgtggatgagacctaccgtaaacctgtcttaggaaaagcatacgaacgggattcttcg
ctgactctcactaggctatttgatcggctgaaacttcaagattcctccaaaaaggaagcg
gattccaaatctgcagttgaggactccaccctgtctcgatactcccaaacatctacttgg
aaggtggcttcggtatggggacgaggggacactgaccggagctcacacaggcgctcccgc
tccgtcccttcttccctgcaggcatctgcaagggaggagtccaggtctgagctgtcaggg
aggactacacggacagaagggtccagtgtgggaggtaccttctccagggccaccaccctt
tcacggggccagtcccgtaagaaaaagcgaaagcccaaggtggattaccagcaggtattc
actcggcacataaatcagattttcattcgaggcgagaatgtcctgctggtccatctggcc
cagtga

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Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (2)   
   OC (1)   
Protein sequence (4)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (15)   
   RefSeq(nuc) (1)   
   GenBank (7)   
   EMBL (7)   
Protein domain (1)   
   Pfam (1)   
All databases (37)   

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