KEGG   Mus musculus (house mouse): 72935
Entry
72935             CDS       T01002                                 
Symbol
Ddx41, 2900024F02Rik, ABS
Name
(RefSeq) DEAD box helicase 41
  KO
K13116  ATP-dependent RNA helicase DDX41 [EC:3.6.4.13]
Organism
mmu  Mus musculus (house mouse)
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:mmu03041]
    72935 (Ddx41)
Enzymes [BR:mmu01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.4  Acting on acid anhydrides to facilitate cellular and subcellular movement
    3.6.4.13  RNA helicase
     72935 (Ddx41)
Spliceosome [BR:mmu03041]
 Complex C
  Other components
   Complex C specific factors
    72935 (Ddx41)
SSDB
Motif
Pfam: DEAD Helicase_C zf-CCHC ResIII UTP25 ERCC3_RAD25_C SecA_DEAD
Other DBs
NCBI-GeneID: 72935
NCBI-ProteinID: NP_598820
MGI: 1920185
Ensembl: ENSMUSG00000021494
UniProt: Q91VN6 Q3UAC4 Q9CUY2
Position
13:complement(55678223..55684471)
AA seq 622 aa
MEDSEPERKRARADEATAGGSRSEDEDEDDEDYVPYVPLRQRRQLLLQKLLQRRRKGATE
EEQQDSGSEPRGDEDDIPLGPQSNVSLLDQHQHLKEKAEARKESAKEKQLKEEEKILESV
AEGRALMSVKEMAKGITYDDPIKTSWTPPRYVLSMSEERHERVRKKYHILVEGDGIPPPI
KSFKEMKFPAAILRGLKKKGILHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVI
MFCLEQEKRLPFSKREGPYGLIICPSRELARQTHGILEYYCRLLQEDSSPLLRCALCIGG
MSVKEQMETIRHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMIDMGFEGDIRT
IFSYFKGQRQTLLFSATMPKKIQNFAKSALVKPVTINVGRAGAASLDVIQEVEYVKEEAK
MVYLLECLQKTPPPVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFRE
GKKDVLVATDVASKGLDFPAIQHVINYDMPEEIENYVHRIGRTGRSGNTGIATTFINKAC
DESVLMDLKALLLEAKQKVPPVLQVLHCGDESMLDIGGERGCAFCGGLGHRITDCPKLEA
MQTKQVSNIGRKDYLAHSSMDF
NT seq 1869 nt   +upstreamnt  +downstreamnt
atggaggattcggaaccggagcggaagcgggcacgcgcggacgaggcgaccgcgggtggg
agccgctccgaggacgaggatgaggacgacgaggactacgtaccctatgtgccgttgcgg
cagcgccggcagctactgctccagaagctgctgcagcgaagacgcaagggcgctacggag
gaagagcagcaggacagtggcagtgagccccgaggagatgaggacgacatcccgctgggc
cctcagtccaatgtcagcctcctggatcagcaccagcacctcaaagagaaggctgaagca
cgcaaggagtccgccaaggaaaagcaactgaaggaagaagaaaagattctggagagtgtg
gctgaaggccgagccttgatgtcagtgaaggaaatggccaaaggcatcacctatgacgat
ccaatcaaaactagttggacacccccgcgttatgtcctgagcatgtctgaggagcggcat
gagcgagttcggaagaagtatcacatcctggtggagggcgatggtatcccgccacccatc
aagagcttcaaggagatgaagtttcctgcagctatccttcggggcctgaaaaaaaagggc
atcctccacccaacacccattcagatccagggcatccctaccattctgtccggtcgggac
atgatcggcattgccttcacggggtcaggcaagacactggtattcactctgccagtcatc
atgttctgcctggaacaggagaagcggttgcctttctccaagcgagaggggccttatggg
ctcatcatctgcccctcgcgagagctggctcggcagacccacggcatcctggagtattac
tgccgtctgctgcaggaggacagctcacccctcctgcgctgtgccctctgcatcgggggc
atgtcggtgaaggagcagatggagaccatccgacatggtgtgcacatgatggtagccaca
cctggacgcctcatggatttgctgcagaagaaaatggtcagcctagacatctgccgctac
ctagccctggatgaagctgaccgcatgattgacatgggctttgagggtgacattcgtacc
atcttctcctacttcaagggccaacggcagactctgctcttcagtgccaccatgccgaag
aagattcaaaactttgccaagagtgccttggtaaagcctgtcaccatcaatgtgggtcgt
gctggagcagccagccttgatgtcatccaggaggtggagtatgtgaaggaggaagccaag
atggtgtacttgcttgagtgcctgcagaagacacccccacctgtgctcatctttgcagag
aagaaagcagatgtggatgccattcacgaatacctcctgctcaagggtgttgaggctgta
gccattcatgggggcaaagaccaggaagagcggaccaaggccattgaggcattccgggaa
ggcaagaaggacgtcttagtggccacagatgtggcctctaaaggcctggactttcctgcc
atccagcatgtcatcaactatgacatgcctgaagagatagaaaactatgtgcacagaatt
ggccgcactgggcgttcaggaaacacaggcatcgctaccaccttcatcaacaaggcctgc
gatgagtcagtgctcatggacctcaaagccttgttgctggaggccaagcagaaggtacca
cctgttctgcaagtgctgcactgtggggacgagtccatgctggacattggaggagaacgg
ggctgtgccttctgtggaggccttggccatcggatcactgactgccccaaacttgaagct
atgcagaccaagcaggtcagcaacattggccgcaaggactacctggcccacagctccatg
gacttctga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (1)   
   OC (1)   
Protein sequence (6)   
   UniProt (3)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (33)   
   RefSeq(nuc) (3)   
   GenBank (15)   
   EMBL (15)   
Protein domain (8)   
   Pfam (8)   
All databases (68)   

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