KEGG T01002: 73288

Mus musculus (house mouse): 73288

Entry

73288             CDS       T01002

Symbol

Vps50, 1700034M03Rik, 8430415E05Rik, BLM, Ccdc132, mKIAA1861

Name

(RefSeq) VPS50 EARP/GARPII complex subunit

K23288

syndetin

Organism

mmu Mus musculus (house mouse)

Brite

KEGG Orthology (KO) [BR:mmu00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:mmu04131]
    73288 (Vps50)
Membrane trafficking [BR:mmu04131]
Protein recycling
  Others
   EARP complex
    73288 (Vps50)

SSDB

Motif

Pfam:

Vps54_N Syndetin_C

Other DBs

NCBI-GeneID:

NCBI-ProteinID:

MGI:

Ensembl:

UniProt:

Position

6:3498393..3603531

AA seq 964 aa
MQKIKSLMTRQGLKSPPESLNDLGAFESLRVPGKEEFRELREQPSDPQAEQELINSIEQV
YFSADPFDIVKYELEKLPPVLNLQELEEYRDKLKQQQSAVSKKVADLILEKQPAYVKELE
RVTSLQTGLQLAAVICTNGRRHLNIAKEGFTQASLGLLANQRKRQLLIGLLKSLRTIKTL
QRTDIRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKICKNFDINHYTKVQQAYRLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNT
DTKFQKLQYKDLCTHVTPDSYIPCLADLCKALWEVMLSYYRTMEWHEKHDNEETAAAAEG
SNVMSTEEATFDRGYVKKKLEHGLTRIWQDVQLKVKTYLLGTDLSIFKYDDFIFVLDIVS
RLMQVGEEFCGSKSEVLQESIRKQSVNYFKNHHRIRLDELRMFLENETWELCPVKSNFSI
LQLHEFKFLEQSRSPSVSPSKQPSATSSKPVTLFEQYCSGGNPFEIQADHKDEETEDVLA
SNGYESDEQEKSAYQDYDSDSDVPEELKRDYVDEQTGDVPVKSVSRETLKSRKKSDYSLN
KVNAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHFMSQLFDYYLYAIYTFFGRNDSL
ESTGLGLSSSRLKTTLNRIQESLIDLEGSADPTATLTAAEERKEKVPSPHLNQLVILTSG
DTLYGLAERVVATESLVFLAEQFEFLQPHLDAVMPAVKKPFLQQFYSQTVSTASELRKPI
YWIVAGKAIDYEQMLLLMMNVKWDVKEIMSQHNIYVDALLKEFEQFNKRLNEVSKRVRIP
LPVSNILWEHCIRLANRTIVEGYANVKKCSNEGRALMQLDFQQFLMKLEKLTDIRPIPDK
EFVETYIKAYYLTENDMERWIKEHREYSTKQLTNLVNVCLGSHINKKARQKLLAAIDEID
RPKR

NT seq 2895 nt +upstreamnt +downstreamnt
atgcaaaaaatcaaatctctcatgacccggcagggtctgaagagccctccggagagcctc
aatgatcttggtgcctttgagagccttcgggtccctggaaaggaggaattcagggagctt
cgagaacagccaagcgaccctcaagctgagcaagagttgattaatagcattgaacaagtc
tatttttctgcggatccatttgatattgttaaatatgagctggagaagcttcctcctgtt
ctcaatctgcaagagttagaggagtacagagacaaattaaagcaacaacaatctgcagtc
tctaaaaaagtggcagatttgattcttgaaaagcagcctgcttatgtaaaggaacttgaa
agagtcacatcactgcagacaggtcttcagttggctgctgtcatctgcacaaatgggagg
aggcacttgaatattgcaaaggaaggttttactcaggctagcttaggccttcttgcaaat
caaaggaagcgtcagttgctaattggacttctgaagtcgctgagaaccataaaaacattg
caaagaactgacatacgcttaagtgaaatgctggaggaagaggactatccaggagctatt
cagctgtgcctagaatgtcagaaggctgccagcacttttaaacactacagctgtataagt
gagctgaattcaaagctgcaagatactttggagcaaattgaggaacagttggatgtagct
ctttccaaaatctgcaagaattttgacattaaccattataccaaggttcagcaagcttac
cggcttcttggaaaaacacagactgcgatggatcagcttcatatgcacttcactcaagcc
attcacaacaccgtatttcaggttgtgcttggctatgtggagctgtgtgcaggaaacacg
gatacaaaattccagaagcttcagtataaagatctctgtacgcatgtgacaccagacagc
tatattccatgcctggcagacctgtgcaaagcactgtgggaagtcatgctcagctactac
agaaccatggagtggcacgagaaacatgacaatgaggaaacagctgcagctgctgaagga
agcaatgtgatgagtactgaggaggccacttttgaccgtggctatgtaaagaagaagtta
gagcacggccttacccggatatggcaggatgttcaactaaaagtaaaaacctacttgctt
ggaactgatttatctatattcaaatatgatgatttcatctttgttctggatattgtcagc
aggttgatgcaagttggagaagaattttgtggtagcaagtctgaagttttgcaggagtcc
attagaaaacaaagtgtcaattacttcaagaaccaccataggatacgacttgatgaactg
agaatgttcttagagaatgagacatgggagctttgccctgttaagtcaaattttagcatc
ttgcagcttcatgagtttaaattcctggaacagtctcgctccccatcagtttcacctagt
aagcagccatcagcaacttcttcaaagcctgtgactttgtttgagcagtactgcagtggt
gggaatccatttgaaatacaagccgaccacaaagatgaagaaactgaagatgtcttagcc
tctaatgggtatgagtctgatgagcaagagaagagcgcctatcaggactatgacagtgac
agcgacgtccctgaggagctgaagcgggattacgtggacgagcagaccggcgacgtgccc
gtgaagagtgtttcccgagagaccctgaagagcaggaagaagtcggattacagtctaaac
aaagtgaatgcacccatcttaacaaacacaacactgaatgtaataaggcttgttggaaag
tacatgcagatgatgaacatccttaagccaatcgccttcgatgtgatccatttcatgtct
cagctctttgactattacttgtatgccatatataccttttttggtcggaatgattcattg
gaatcaacaggacttggccttagtagtagcagactaaaaacaactctaaacagaattcaa
gaaagccttattgacctggagggctcagctgatccaactgccactctcacagcagccgag
gaaagaaaggagaaggtacccagcccacacctcaatcagctagtgattttgacatctggg
gatacattgtatgggttggcagagagagtggtagccacagaatccttagtgttcttggct
gagcagtttgagttccttcagccacatttggatgctgtgatgcctgcagtcaaaaagccc
ttcctgcagcagttttactcccagacagtctcaactgccagtgaactgcgcaagcccatt
tactggattgtggctggtaaagctattgattatgaacagatgcttctcctaatgatgaat
gtgaagtgggatgtcaaagagatcatgtcacagcacaacatctatgtagatgcattgctg
aaggaatttgagcagtttaacaagcggttaaatgaagtttctaagagagttcggatacct
ctgcctgtatcaaatatactttgggagcattgtatacgattagctaacagaactattgtg
gaaggatacgccaatgtcaagaaatgcagtaatgaggggcgtgccttgatgcaattggat
tttcaacagtttttaatgaaactcgaaaaactaactgacattagacctattcctgataaa
gaatttgtggaaacgtatatcaaagcctactacctaactgagaatgacatggagcgttgg
atcaaagagcacagggaatactcaacgaagcagttgaccaacctggtgaatgtttgccta
ggatctcatatcaataagaaagcaagacagaagctcctagcagctatagatgagatagac
aggcctaaaagataa

All links

Gene (13)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (1)   
   OC (1)   
Protein sequence (6)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (4)   
DNA sequence (34)   
   RefSeq(nuc) (4)   
   GenBank (15)   
   EMBL (15)   
Protein domain (2)   
   Pfam (2)   
All databases (55)   

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