KEGG   Mus musculus (house mouse): 73750
Entry
73750             CDS       T01002                                 
Symbol
Whrn, 1110035G07Rik, C430046P22Rik, Dfnb31, Ush2d, wi
Name
(RefSeq) whirlin
  KO
K21879  whirlin
Organism
mmu  Mus musculus (house mouse)
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:mmu03037]
    73750 (Whrn)
Cilium and associated proteins [BR:mmu03037]
 Primary cilia and associated proteins
  USH complex and associated proteins
   73750 (Whrn)
SSDB
Motif
Pfam: PDZ PDZ_6 PDZ_2 USH1C_N DUF6288 CCM2_C PDZ_4
Other DBs
NCBI-GeneID: 73750
NCBI-ProteinID: NP_001008791
MGI: 2682003
Ensembl: ENSMUSG00000039137
UniProt: Q80VW5
Structure
Position
4:complement(63333145..63414320)
AA seq 918 aa
MNAQLDGLSVSSSSTGSLGSAAAAAGGGGGAGLRLLSANVRQLHQALTALLSEPEREQFT
HCLNAYHARRNVFDLVRTLRVLLDSPVKRRLLPMLRLVIPRSDQLLFDQYTAEGLYLPAT
TPYRQPAWAAPDGAGPGEVRLVSLRRAKAHEGLGFSIRGGSEHGVGIYVSLVEPGSLAEK
EGLRVGDQILRVNDKSLARVTHAEAVKALKGSKKLVLSVYSAGRIPGGYVTNHIYTWVDP
QGRSTSPPSSLPQPHGSTLRQREDDRRSTLHLLQSGDEKKVNLVLGDGRSLGLTIRGGAE
YGLGIYITGVDPGSEAESSGLKVGDQILEVNGRSFLNILHDEAVKLLKSSRHLILTVKDV
GRLPHARTTVDQTKWIASSRIGESVANSAGFPGDHTEEGTSKPGFYKGPAGSQVTLSSLG
NQTRALLDDQARHLLTEQERATMMYYLAQYRGGTISVEAMVMALFELLNTHAKFSLLSEV
RSIISPQDLDRFDHLVLRREIESMKARQPPGPGVGDTYSMVSYSDTGSSTGSHGTSTTVS
SARERLLWLIDLMENTLDLEGTGETTQGSTNALPDVSVDDVKSPSEDLPGIKPPPPPPPL
AQGHDRLLGQPRKPGREDPAPLSSAAHSGIVFSAPRNRSPPPGTAPTPGPSSAQDSPSSP
IYASISHANPSSRKPLDTHLALVNQHPIGPFPRVQSPPHLKSPPAETPGAGACLPPPSPS
EHPDAVGANQHFVLVEVHRPDSEPDVNEVRALPQTRTASTLSQLSDSGQTLSEDSGVDAG
ETEASTSGRGRQTASAKNKNGKEQPRTERTAEGANKPPGLLEPTSTLVRVRKSAATLGIA
IEGGANTRQPLPRIVTIQRGGSAHNCGQLKVGHVILEVNGQTLRGKEHKEAARIIAEAFK
TKERDYIDFLVTEFNVML
NT seq 2757 nt   +upstreamnt  +downstreamnt
atgaacgcacagctggacggcctgtcggtgagctcgtcctccaccggctcgctgggctcg
gcggcggcggcggcgggcggcggcgggggcgcggggttgcggctgctgtctgccaacgtg
cgccagctgcaccaagcgctcacggcgctgctgagcgagcccgagcgggagcagttcact
cactgcctcaacgcgtaccacgcgcgccgcaacgtcttcgacctggtgcgcaccctgcgc
gtcctgctggacagcccggtcaagcggcgtctgctgcccatgctgcgtctggtcatcccg
cgctccgaccagctgctcttcgaccagtacacggccgagggcctctacctgccagccacc
accccctacaggcagcccgcctgggccgctcccgacggcgcggggcccggggaggtgcga
ctcgtgagcctgcggcgcgccaaggcccacgagggcttgggcttcagcatccgcgggggc
tcggaacacggcgtgggcatctacgtgtctctagtggagccgggctccctggcagagaag
gaagggttgcgggtcggggaccagattctgcgcgtcaacgataaatctctagcccgggtg
acccacgcggaggctgtcaaggctctcaaaggctccaagaagctggtgctgtctgtatac
tcagctgggcgtatcccagggggctatgtgaccaaccacatctacacctgggtggaccca
cagggtcgaagcacatcccctccctccagcctgccccagccccatggcagcaccctgaga
cagcgtgaagatgaccgaaggagtaccctccacctcctgcagagtggagatgagaaaaag
gtgaacctggtgttgggggacggccggtccttgggcctcacgatccgaggtggagcagag
tacggccttggcatttacatcactggtgtggacccaggctctgaagcagagagcagcggc
ctcaaggttggagaccagattctggaggtgaatgggcggagctttctcaacatcctgcat
gatgaggcagtgaagctgctcaagtcatcccggcacctcatcctgacggtgaaggacgtc
ggaaggctgccccacgcacgtaccaccgtggaccagaccaagtggatcgccagttcccgg
atcggggaaagcgtcgccaactcagcagggtttccaggggaccacacagaagaagggaca
agcaagccaggattttacaagggcccagccggctcccaggtgaccctgagcagcctgggg
aatcagactcgtgcactgctggacgaccaagccaggcacctgctgacagagcaggagcgc
gccaccatgatgtactacctggcccagtaccgtggtggcaccatctctgtggaggccatg
gtcatggcactgtttgagttgctcaacacacacgccaagttctcactcctgtctgaggtg
agaagcatcatctcaccccaagacctggaccgctttgaccacctggtgctgaggcgcgag
atcgagtctatgaaggcgaggcagccccccggccccggggttggagacacgtattccatg
gtttcctacagcgacacaggctcatccacaggcagccacggcacctctacaaccgtcagc
tcggccagggagcggctgctgtggcttatagacctgatggagaatacattagacctggaa
ggaaccggtgagaccacccagggcagcaccaacgctctcccggatgtgtctgtggatgat
gtcaaatccccctcagaagatctgcctggtatcaagccacctcctcccccaccacccctg
gctcaaggtcatgaccgcttgcttggccagccacggaagccagggagggaggaccccgca
cctctgtcttctgctgcccactcaggcattgtcttctcagcaccacggaaccgcagcccg
ccgccagggactgctcccactccgggaccttcctcagcacaggactctccctcctccccc
atttatgcctccatctcccatgccaaccccagttccagaaagccgctggacacccacctg
gccctggttaaccagcaccccatcggccccttccctcgagtccagtccccacctcacctg
aagagccctcctgcagagaccccaggagctggggcctgccttccaccaccatcaccctct
gaacaccctgacgccgtgggtgcaaaccagcactttgttctggtggaggtgcaccgtccg
gacagtgagcctgatgtgaatgaagtgcgggctctgccccagactcgcacagcctccaca
ctctctcagctctcagacagtgggcagaccctgagcgaggacagtggcgtggatgccggg
gagacggaggccagcacctcaggccgaggcagacagacagcatccgctaagaacaagaat
ggcaaggagcagccccggacggagaggaccgcggagggtgccaacaaacctcccggcctg
ctggagccaacgtccaccctggtccgtgtgaggaaaagtgcagccacactgggcatcgcc
attgagggcggtgccaacacacgccagcctctgcccaggatcgtcacaattcagcgagga
ggttctgcccataactgtggacagctcaaggtgggccacgtaattctggaagtgaatggg
cagacacttcggggtaaggagcacaaggaggccgcccgaatcatcgctgaggccttcaag
accaaggagagagactacatcgactttctggtcactgagttcaacgtgatgctctag

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Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (32)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (26)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (8)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (6)   
DNA sequence (52)   
   RefSeq(nuc) (14)   
   GenBank (19)   
   EMBL (19)   
3D Structure (7)   
   PDB (7)   
Protein domain (7)   
   Pfam (7)   
All databases (109)   

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