KEGG   Mus musculus (house mouse): 77040
Entry
77040             CDS       T01002                                 
Symbol
Atg16l1, 1500009K01Rik, Apg16l, Atg16l, WDR30
Name
(RefSeq) autophagy related 16 like 1
  KO
K17890  autophagy-related protein 16-1
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu04136  Autophagy - other
mmu04140  Autophagy - animal
mmu04621  NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    77040 (Atg16l1)
   04136 Autophagy - other
    77040 (Atg16l1)
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    77040 (Atg16l1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:mmu04131]
    77040 (Atg16l1)
   03029 Mitochondrial biogenesis [BR:mmu03029]
    77040 (Atg16l1)
Membrane trafficking [BR:mmu04131]
 Autophagy
  Autophagosome formation proteins
   Atg12 conjugation proteins
    77040 (Atg16l1)
 Others
  Rab GTPases of specific organelles
   Auto phagosome
    77040 (Atg16l1)
Mitochondrial biogenesis [BR:mmu03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    77040 (Atg16l1)
SSDB
Motif
Pfam: ATG16 WD40 ANAPC4_WD40 NBCH_WD40 eIF2A KASH_CCD TolB_like APEH_N
Other DBs
NCBI-GeneID: 77040
NCBI-ProteinID: NP_084122
MGI: 1924290
Ensembl: ENSMUSG00000026289
UniProt: Q8C0J2
Structure
Position
1:87683730..87720150
AA seq 607 aa
MSSGLRAADFPRWKRHIAEELRRRDRLQRQAFEEIILQYTKLLEKSDLHSVLTQKLQAEK
HDMPNRHEISPGHDGAWNDSQLQEMAQLRIKHQEELTELHKKRGELAQLVIDLNNQMQQK
DKEIQMNEAKISEYLQTISDLETNCLDLRTKLQDLEVANQTLKDEYDALQITFTALEEKL
RKTTEENQELVTRWMAEKAQEANRLNAENEKDSRRRQARLQKELAEAAKEPLPVEQDDDI
EVIVDETSDHTEETSPVRAVSRAATKRLSQPAGGLLDSITNIFGRRSVSSIPVPQDIMDT
HPASGKDVRVPTTASYVFDAHDGEVNAVQFSPGSRLLATGGMDRRVKLWEAFGDKCEFKG
SLSGSNAGITSIEFDSAGAYLLAASNDFASRIWTVDDYRLRHTLTGHSGKVLSAKFLLDN
ARIVSGSHDRTLKLWDLRSKVCIKTVFAGSSCNDIVCTEQCVMSGHFDKKIRFWDIRSES
VVREMELLGKITALDLNPERTELLSCSRDDLLKVIDLRTNAVKQTFSAPGFKCGSDWTRV
VFSPDGSYVAAGSAEGSLYVWSVLTGKVEKVLSKQHSSSINAVAWAPSGLHVVSVDKGSR
AVLWAQP
NT seq 1824 nt   +upstreamnt  +downstreamnt
atgtcgtcgggcctgcgcgccgcagactttccccgctggaagcgtcacatcgcggaggaa
ctgaggcgccgggaccgactgcagaggcaggcgttcgaggagatcattctgcagtatacc
aagttgctggaaaagtcagatcttcattcagtattgacccagaaactacaagcagaaaag
catgacatgccaaataggcatgaaataagtcctggacatgatggtgcgtggaatgatagt
caactacaagaaatggcccagttgaggatcaaacaccaggaagagctgaccgaactgcac
aagaagcgtggggagttagctcagttggtgattgacctgaacaaccaaatgcagcagaag
gacaaggagatacagatgaatgaagcaaagatttcggagtatttacagaccatctctgac
ctggagacaaactgcctggacctgcgcaccaaactgcaggacctcgaggtagccaaccag
accctgaaggatgagtatgacgccctgcagattacttttactgccctagaagagaaactg
aggaaaactactgaggagaaccaggaactggtcaccagatggatggctgagaaggcccaa
gaagccaatcgcctcaatgcagagaatgagaaggactccaggaggcgtcaagcacggctg
cagaaggagcttgcagaagcagcaaaggaacctctacctgttgaacaggatgatgacatt
gaagtcattgtggatgagacctcagaccacacagaagagacctctcccgtccgagctgtc
agcagagcagctactaagcgactctcgcagcctgctggaggccttctggattctatcact
aatatctttgggagacgctctgtctcttccatcccagtcccccaggatatcatggacact
catcctgcttctggtaaagatgtgagagtcccaactactgcctcgtatgtcttcgatgcg
catgacggagaggtcaacgcagtgcagttcagtccaggctcccggttgctggccactgga
ggcatggaccgcagggtgaaactttgggaagcattcggagataaatgtgaattcaagggc
tccctgtctggcagtaatgctggaattacaagcattgaatttgatagtgctggagcttac
ctattagcagcttcaaatgattttgcaagccgaatctggactgtggatgattatcgatta
cggcacacactcacaggccacagcgggaaagtcctctctgccaagttcctgctggacaat
gcacggattgtctcaggaagtcacgaccggaccctcaaactctgggatctccgcagcaaa
gtctgcataaaaacagtgtttgcaggatccagctgcaatgacattgtttgcactgaacaa
tgtgtaatgagtggacattttgacaagaaaattcgtttctgggatatccggtcagagagt
gtggtccgagagatggaactgttagggaagatcactgctctggacctaaaccctgagaga
actgagctcctgagctgctcccgtgatgacctgctaaaagtcatcgacctccggacaaat
gcagtcaaacagacattcagtgcgcctggattcaaatgcggctctgactggacccgggtt
gtcttcagccctgatggcagttacgtggcagcaggctcagccgagggttctctttatgtc
tggagtgtgctgacagggaaagtggagaaggttctttcaaaacagcacagctcttctatc
aatgcggtggcgtgggccccctcgggcttacatgttgtcagtgtggacaaaggaagcaga
gctgtgctgtgggcacagccttga

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