KEGG T01002: 77569

Mus musculus (house mouse): 77569

Entry

77569             CDS       T01002

Symbol

Limch1, 3732412D22Rik, mKIAA1102

Name

(RefSeq) LIM and calponin homology domains-containing protein 1 isoform 1

K24422

LIM and calponin homology domains-containing protein 1

Organism

mmu Mus musculus (house mouse)

Brite

KEGG Orthology (KO) [BR:mmu00001]
09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:mmu04990]
    77569 (Limch1)
Domain-containing proteins not elsewhere classified [BR:mmu04990]
LIM domain-containing proteins
  Other lim domain-containing proteins
   77569 (Limch1)

SSDB

Motif

Pfam:

DUF4757 CH LIM

Other DBs

NCBI-GeneID:

NCBI-ProteinID:

MGI:

Ensembl:

UniProt:

Position

5:66903232..67214502

AA seq 1057 aa
MACPALGLEVLQPLQPEPPPEPAFAEAQKWIEQVTGRSFGDKDFRTGLENGILLCELLNA
IKPGLVKKINRLPTPIAGLDNTILFLRGCKELGLKESQLFDPSDLQDTSNRVTVKNLDYS
RKLKNVLVTIYWLGKAANSCASYGGTTLNLKEFEGLLAQMRKETDDIDSPKRSIRDSGYI
DCWDSERSDSLSPPRHGRDDSFDSLDSFGSRSRQTPSPDVVLRGSSDGRGSDSESDLPHR
KLPDVKKDDMSARRTSHGEPKSAVPFNQYLPNKSNQTAYVPAPLRKKKAEREEFRKSWST
ATSPLGGERPFRYGPRTPVSDDAESTSMFDMRCEEEAAVLPHSRARQEQLQLINNQLREE
DDKWQDDLARWKSRRRSASQDLIKKEEERKKMEKLMSGEDGTSERRKSIKTYREIVQEKE
RRERELHEAYKNARSQEEAEGILQQYIERFTISEAVLERLEMPKILERSHSTEPNVSSFP
NDPSPMKYLRQQSLPPPKFTATVETTIARTSVPESIASAGTGSPSKIITPNTVPMLTPRP
YSQPKNSQEVLKTFKVDGKVSMNGEMAPGDEEGKEKEGPAAAAPGPSLTKSQMFEGVATV
HDSPVQVKQGSNSIEINIKKPNSAPQELTAASEETESNGQEDEDGEERPGTGDLEPDSAE
PQHFTTTVTRCSPTVALVEFSSNPQLKNEVPEQGQKKPEDEMSGKVELVLSQKVAKPKSP
EPEATLTFPFLDKMPETNQLHLPNPSSQADSPSSEKSPGSTPFKFWAWDPEEERRRQEKW
QQEQERLLQERYQKEQDKLKEEWEKAQKEVEEEERRYYEEERKIIEDTVVPFTISSSSAD
QLSTSLSVTEGSGTRNKMDLENCPDKENERRQKTPFQENDGDSLLKTREGGLPEEQSLTP
SPSANPEISVSKGIHQDPQLEAEAGAPHCGTNPQPAQDPPRNQQIPNPPTSTSEDVKPKT
LALEKTINHQMESPGERRKSISGKKLCSSCGLTLGKGAAMIIETLNLYFHIQCFRCGICK
GQLGDAVSGTDVRIRNGLLNCTDCYMRSRSAGQPTTL

NT seq 3174 nt +upstreamnt +downstreamnt
atggcttgccccgctctcggtctggaagtccttcaacccctgcagcccgaaccacctccg
gagcctgccttcgccgaggcacagaagtggatcgagcaagtcactggtcgaagttttggt
gacaaagacttccggacaggactagaaaatgggatcctcctttgcgagttgctgaatgct
ataaagccaggacttgttaaaaagatcaatagattgcctacccccattgcaggattggac
aataccatcttattcttgagaggctgtaaggagcttggccttaaagaatctcaactcttt
gacccgagtgacctccaggatacctccaacagggtcactgtcaagaacctcgattatagc
aggaagctgaaaaacgtgctagtgaccatttactggctggggaaagctgcaaacagctgt
gcatcctacggtggaaccacactgaacctgaaggagtttgaagggctgttggctcagatg
cgaaaggagactgacgacattgatagcccgaagcgcagcatccgagacagtggctacatc
gactgctgggactctgaacgcagcgactccctctctcctcctcgccacggacgggatgac
tcctttgacagcctggattcttttggctcccgctccaggcagacaccttcgccagatgta
gttctcaggggaagcagtgatggaagaggaagcgattctgaatcagacttgccgcaccgg
aagttgccagatgtgaagaaagatgatatgtccgcacgaaggacttctcatggtgagccg
aaatcagcagtgccttttaaccagtacctcccgaacaaaagcaaccagacggcctacgtc
ccggcgcctctgagaaagaagaaggcggagcgggaggaattcaggaagagttggagcacc
gccacctcccccctgggtggggaaaggcccttcagatacggtcccagaactcctgtgtca
gatgacgcagagagcacgagtatgtttgacatgcggtgtgaggaggaggcagcggtgctg
ccgcacagcagggcccgccaggagcagctgcagctgataaataaccagctgagggaagag
gacgacaaatggcaagatgacctggctcgctggaagagccggagaagaagcgcttctcag
gacttgatcaagaaagaggaagaaaggaaaaaaatggagaagctgatgtctggggaagat
gggacaagtgagcggaggaaaagcatcaaaacttacagagaaatcgtccaagaaaaagag
cggagagagagggaacttcatgaggcgtacaagaacgcaaggtcgcaggaggaggccgag
gggatcctccagcagtacatcgagaggttcaccatcagtgaggctgtcctcgaacgcttg
gagatgccaaaaatcctggaaagaagccattcaacagagccaaacgtgtcctccttccca
aacgaccccagccccatgaagtacctgcggcagcagtcactgcccccacccaagttcact
gccacggttgagaccaccatagctcgcaccagtgtcccagagagcattgcgtcagcaggc
actgggtctccaagcaaaatcatcactccaaacacagtgcctatgctgacacccaggcct
tactcccagcccaaaaactctcaagaggttctgaagacttttaaggtagatgggaaggtc
agcatgaatggggaaatggcccctggagatgaggaaggaaaggaaaaagaaggccctgca
gctgcagcccctggcccttccttaaccaagtcccagatgtttgaaggtgtggccacggtg
cacgactctcctgtgcaggtgaaacaaggcagcaacagcatcgagatcaacatcaagaag
ccaaattctgctccccaggaactgacagcagcctctgaggaaactgaatcgaacggccaa
gaggatgaagacggtgaagaaaggccagggacaggggatttggagcctgactcggcagaa
ccccagcactttacgacaactgtgactcggtgcagcccaacagtggccttggtggagttt
tcatccaacccgcagctgaagaatgaggtgccagaacaaggccagaagaagccagaagat
gagatgagtgggaaggtggagttagtgttgtcacagaaggtggcaaagccaaaatcccca
gagcctgaagcaaccctgacgtttccatttctcgacaaaatgcctgaaaccaaccaacta
catttgccaaatcccagttctcaagcggattctccaagcagtgaaaagtcccctgggagc
acaccctttaagttctgggcatgggacccagaagaggagcgccggcgacaggagaaatgg
cagcaggagcaggaacgtctgctgcaggagaggtatcagaaggagcaagacaagctgaag
gaggagtgggaaaaggcccagaaggaggtcgaagaagaagaacgcagatactacgaggag
gagcgtaagataattgaagacacggtggttccattcactatttcctcaagctctgcagac
caactgtctacgtccttgtctgtaactgaaggcagcgggacaaggaataagatggacttg
gaaaactgcccagacaaagaaaacgagagaagacagaagacgcctttccaggagaatgac
ggtgattcattgctcaaaactagagaaggtggtctgccagaggagcagagcctaactcca
agtccctcggctaaccctgaaatctccgtgtcaaaaggaatccatcaggacccgcagctg
gaggcagaggctggggccccacactgtggtacaaacccacagccagctcaggatccacct
cggaatcaacagataccaaacccaccaacatccacgtcggaagatgtgaagcccaaaacc
ttggccctggagaaaaccatcaatcatcagatggagtctccgggggaaaggcggaagtct
ataagcgggaagaaactgtgctcctcctgcgggctcactttgggtaaaggtgctgcgatg
atcatcgagaccctgaatctctactttcacattcagtgtttcaggtgcggcatctgtaaa
ggacagctcggagatgcagtaagcgggacagacgtcaggattcgcaatggtctcctaaac
tgtaccgactgctacatgcgatccagaagtgccggccagcctacaacactgtga

All links

Gene (13)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (1)   
   OC (1)   
Protein sequence (31)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (29)   
DNA sequence (56)   
   RefSeq(nuc) (30)   
   GenBank (13)   
   EMBL (13)   
Protein domain (3)   
   Pfam (3)   
All databases (103)   

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