KEGG   Mus musculus (house mouse): 78913
Entry
78913             CDS       T01002                                 
Symbol
Ltn1, 4930528H02Rik, Listerin, Rnf160, Zfp294
Name
(RefSeq) E3 ubiquitin-protein ligase listerin isoform 1
  KO
K22377  E3 ubiquitin-protein ligase listerin [EC:2.3.2.27]
Organism
mmu  Mus musculus (house mouse)
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:mmu03009]
    78913 (Ltn1)
   04121 Ubiquitin system [BR:mmu04121]
    78913 (Ltn1)
Enzymes [BR:mmu01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     78913 (Ltn1)
Ribosome biogenesis [BR:mmu03009]
 Eukaryotic type
  Pre-60S particles
   Ribosome quality control proteins
    78913 (Ltn1)
Ubiquitin system [BR:mmu04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    78913 (Ltn1)
SSDB
Motif
Pfam: Ltn1_1st LTN1_E3_ligase_6th UBC_like LTN1_E3_ligase_5th zf-RING_2 FANCL_C zf-ANAPC11 zf-rbx1 RINGv zf-RING-like zf-RING_16 HipN
Other DBs
NCBI-GeneID: 78913
NCBI-ProteinID: NP_001074537
MGI: 1926163
Ensembl: ENSMUSG00000052299
UniProt: Q6A009
Position
16:complement(87173539..87229504)
AA seq 1767 aa
MGGKNKQRTKGNLRPSNSGRAAELLAKEQGTVPGFIGFGTSHSDLGYVPAVQGAEDIDSL
VDSDFRMVLRKLSKKDVTTKLKAMQEFGIMCTERDTEAVKGVLPYWPRIFCKISLDHDRR
VREATQQAFEKLILKVKKHLAPYLKSVMGYWLMAQCDTYPPAALAAKDAFEAAFPPSKQP
EAIAFCKEEITTVLQDHLLKETPDTLSDPQTVPEEEREAKFHRVVTCSLLALKRLLCFLP
NNELDSLEEKFKSLLSQNKFWKYGKHSVPQVRSAYFELVSALCQHVPQVMKEEAAKVSPS
VLLSIDDSDPVVCPALWEAVLYTLTTIEDCWFHVNAKKSVFPKLMAMIREGGRGLAAVMY
PYLLPFISKLPQSITEPKLDFFKNFLTSLVTGLSTERTKSSSSECSAVISAFFECLRFIM
QQNLGEEEMVQMLINEQLIPFIDTVLKDSGLHHGPMFDHLADTLSSWEAKADAERDPGAV
YNLENVLLSFWGRLSEICTEKIRQPEADVKSVLCVSSLVGVLQRPRSSLKLHRKKTAQVR
FAINIPEAHKGDEKSMSSEGENSEGSDGGAQSPLSNTSSDLVSPLRKKPLEDLVCKLAEV
SISFVNERKSEQHLQFLSTLLDSFSSVQVFNILLSDKQKNVVKAKPLEITKLAEKNPAVK
FLYHKLIGWLNDSQKEDGGFLVDILYSALRCCDSGVERKEVLDDLTKEDLKWSSLLQVIE
KACSSSDKHALVTPWLKGSILGEKLVALADCLCDKDLEATTSESHSSEQWSLLRLALSQH
VKNDYLIGEVYVGRIIVKLHETLSKTKDLSEAANSDSSVSFVCDVVHSFFSSAGGGLLMP
PSEDLLLTLFQLCAQSKERTHLPDFLICKLKNTLLSGVNLLVHQTASTYEQSTFLRLSVL
WLKDQVQSSALDNTSLQVLLSAAGDLLGTLVESEDTSLLGVYIGSVMPSDSEWEKMRQAL
PVQWLHRPLLEGRLSLNYECFKTDFKEQDTKTLPNHLCTSSLLSKMILVAQKKKLVLEDN
VLEKIIAELLYSLQWCEELDNAPSFLSGFCGILQKMNITYSNLSVLSETSSLLQLLFDRS
RKNGTLWSLIIAKLILSRSISSDEVKPYYKRKESFFPLTEGSLHTIQSLCPFLSKEEKKE
FSAQCIPAFLGWTKEDLCSINGAFGHLAIFNSCLQTRSIDDKQLLHGILKIITSWRKQHE
DIFLFSCNLSEASPEVLGLNIEIMRFLSLFLKHCAYPLPLADSEWDFIMCSMLAWLETTS
ENQALYSVPLVQLFACVSFDLACDLCAFFDSITPDIVDNLPVNLISEWKEFFSKGIHSLL
LPLLVNAIGENKDLSETSFQNAMLKPMCETLTYISKDQLLSHKLPARLVASQKTNLPEHL
QTLLNTLTPLLLFRARPVQIAAYHMLCKLMPELPQHDQDNLRSYGDEEEEPALSPPAALM
SLLSSQEELLENVLGCVPVGQIVTVKPLSEDFCYVLGYLLTWKLILTFFKAASSQLRALY
SMYLRKTKSLNKLLYHLFRLMPENPTYGETAIEVSSKDPKTFFTEEVQLSIRETATLPYH
IPHLACSVYHMTLKDLPAMVRLWWNSSEKRVFNIVDRFTSKYVSNVLSFQEISSVQTSTQ
LFNGMTVKARATTREVMATYTIEDIVIELIIQLPSNYPLGSITVESGKRIGVAVQQWRNW
MLQLSTYLTHQNGSIMEGLALWKNNVDKRFEGVEDCMICFSVIHGFNYSLPKKACRTCKK
KFHSACLYKWFTSSNKSTCPLCRETFF
NT seq 5304 nt   +upstreamnt  +downstreamnt
atgggcgggaagaacaagcagcggactaaggggaacctcaggccttcaaacagtggccga
gctgcagaactcctcgccaaagagcagggaacagtgcctgggttcattggttttggcaca
tctcacagtgacctgggctatgttccggctgttcaaggcgcggaagacatagacagtctt
gtagattccgatttccgaatggtgctgcggaaactttccaaaaaagatgttacaacaaag
ctaaaggcaatgcaagaatttggaattatgtgcacagagagagacacagaagccgtcaaa
ggggttcttccatactggccaagaatcttctgcaaaatctcccttgatcatgatcgccgt
gttcgagaggcgacgcagcaagcttttgaaaaacttatccttaaagtaaagaagcactta
gctccctatttaaaaagcgtgatgggctattggttgatggctcagtgtgacacatatcca
ccagctgcactggcagcaaaagatgcattcgaagccgctttccctccaagcaagcaacct
gaagccatagcgttttgcaaggaagaaattacaactgtgttacaggaccatcttctgaag
gagactcctgacacactcagtgaccctcaaactgtgccagaggaagagagagaggctaag
ttccaccgagtcgtgacgtgctctttattggcactgaagagattgctttgtttcttacct
aacaatgagcttgattctctggaggagaaatttaaatcacttttatcacagaataaattt
tggaagtatggaaaacacagtgtacctcaggtccgctcagcatattttgagttagtttct
gctttgtgccagcacgttccccaggtgatgaaagaggaagctgccaaagtgagtccatct
gtcctgctcagcattgatgacagtgaccctgtggtctgcccagctctctgggaggctgtg
ctctacacgctgacaactattgaggactgttggtttcatgtaaatgccaagaaaagtgtg
tttccgaagctgatggccatgatccgagagggtggccggggcctagctgctgttatgtat
ccttacctcttaccgttcatcagcaaactccctcagtccatcacagagccaaagctggac
ttcttcaaaaacttcctcacctctctagttaccgggctgtcaactgagaggaccaaatcg
agctcttctgagtgctcagctgtcatctcggcattttttgaatgcttgcggtttataatg
cagcagaacttaggcgaggaggagatggtgcagatgcttatcaatgagcagttgatccca
tttattgatacagttctcaaagactcaggactgcaccacggaccgatgtttgaccattta
gcagacacattgagctcttgggaagccaaagcagatgcagagcgagaccctggagctgtt
tacaacttggagaacgttctgctaagcttctggggaagactgtcagagatctgcaccgag
aaaatccgccagccagaagcagatgtgaagtccgttctgtgtgtgtctagcctagtaggg
gtccttcagaggccaaggagctcactgaagttacacagaaagaaaactgctcaggtcagg
tttgccatcaatatacctgaagctcataaaggggatgaaaagtccatgtcttcagaagga
gagaacagcgagggctctgacggaggggctcagtctcctctcagtaatacatcttcagac
ttagtatctcctttaaggaaaaaacctctggaagacttagtctgtaagctggcagaggtg
agcattagctttgtcaacgagcggaagtcagagcagcacctgcagtttctctccacgctg
ctcgactccttctcctccgtccaagtatttaacattctcctcagtgacaaacagaagaat
gtcgtcaaagccaaacctctggaaataaccaaacttgcagaaaaaaatcctgcagttaag
ttcttatatcataaattgataggctggctaaatgacagccagaaagaggacgggggcttc
ctggtggacatcttgtatagtgccctccgatgctgtgacagtggtgtggaaaggaaagaa
gtcttggatgatctaaccaaggaggacctgaagtggagttctcttcttcaggtcattgaa
aaggcatgttctagctcagataaacatgctttagtaactccttggctaaaaggcagtatt
cttggagagaaattggttgccttggcagactgtctttgtgataaggacttggaagccaca
acatctgaatcccactcatcagaacagtggagtctgctaagactggcgttatcccaacat
gtcaaaaacgattacttgattggagaagtatacgttggaagaattattgttaaacttcat
gaaactttatctaaaacaaaggatttatcagaagcggcaaacagtgactcttcagtgtct
tttgtctgtgatgtggtccatagcttcttcagttcagcaggaggaggcttgctaatgcca
ccatctgaagacttgttattaactctctttcagttatgcgctcagagcaaagaacggaca
cacttgccagattttctgatctgtaaactgaagaatactttgctttctggtgtaaattta
ttggtccatcaaactgcaagtacatatgagcagagtaccttcctacgtttgtctgttctg
tggctgaaggaccaggttcagtcttcggctttggataacacaagtcttcaggtcctcttg
tctgctgctggcgacttgctgggtactcttgtagagagtgaggacacgtctcttcttgga
gtttatatcggaagtgtaatgcccagtgacagcgagtgggaaaagatgaggcaggctctt
cctgttcagtggttacacagacctcttttagagggaaggctgagtttaaattatgaatgc
ttcaagacagattttaaggaacaagacacaaagactcttcccaaccatctgtgtacttca
tcgttattgagcaaaatgatcttagttgcccaaaaaaagaaattagtcctagaagacaac
gtccttgaaaaaataattgcagagctgctgtattcactgcagtggtgtgaagaactcgac
aatgcgccatctttcctaagtggattttgtggaatccttcaaaaaatgaatataacttac
agcaacttatctgtacttagtgagacttctagcctcttgcagctgttatttgacagatct
agaaaaaatggcacactttggtctcttattattgctaagttgatcctttcccgaagtatt
tcatctgatgaagtgaaaccatactataaaagaaaagaaagtttcttccctctaacagaa
ggtagtttgcataccattcaaagtctctgtccattcttgtctaaagaagaaaagaaggaa
tttagtgctcagtgtatacccgcttttttgggttggactaaagaagacctttgcagtatt
aatggagcctttggacatcttgccattttcaattcttgtctgcaaaccagaagtatagac
gacaaacagctattgcatggcatattaaaaattataacaagctggaggaaacagcatgaa
gatatttttctttttagctgtaatctgtcggaagcgagtccagaggtccttggtttaaac
atagagatcatgcggttcctttccttgtttctcaagcactgcgcgtacccgctcccgctg
gcagacagtgaatgggacttcatcatgtgctccatgctggcttggttggagacaaccagt
gagaaccaggctctgtactctgttccacttgtgcagctgtttgcctgtgtcagctttgat
ctggcctgtgatctctgtgccttttttgactcaataactccagatattgttgacaatctt
cctgtaaatctcatcagtgagtggaaagagtttttttctaaaggcatccacagtttgcta
ttacctcttttggtaaatgctatcggagaaaacaaagacctatctgaaacgtcctttcag
aacgcaatgctgaaacccatgtgtgaaacactaacatacatctccaaggaccagctactg
agccacaagctccctgcgagattggttgccagccagaaaacaaacttgccagagcacctc
cagactctgctgaacactttgaccccactgcttctcttcagagccagacctgtgcaaatt
gctgcttatcatatgctgtgcaaactgatgcctgaattgccacagcatgatcaggacaat
ctgaggtcgtatggagatgaagaggaagaaccagccttgtcgccgccggccgcgctgatg
tctctcctcagctctcaggaggagctgctggagaatgtcctgggctgtgtccctgtgggc
cagatcgtgaccgttaagccactgagcgaggacttctgctatgtcctgggatacctcctc
acttggaagttaatactgactttcttcaaagctgcatcgtctcagcttcgtgctctgtat
tcaatgtaccttcggaaaacaaagagtctgaataaattactctatcatctcttcagactt
atgccagaaaaccctacgtacggagagacagctattgaggtatcaagtaaagaccccaag
accttcttcaccgaggaggttcagctgagtattagagaaacagcaactcttccgtatcat
atcccacacctggcgtgctcggtctatcacatgactttaaaagacttgcctgccatggtt
aggctatggtggaatagcagtgagaagcgtgtcttcaatattgtagatagatttacaagc
aagtatgtcagcaatgttctttcttttcaagaaatatcttctgtacaaacaagtacacag
ctattcaatggcatgacggttaaggcgcgagctactactcgagaagtgatggctacgtac
accatcgaagacatagtcattgaactcataatacagttgccttccaattacccactgggc
tcaataacagtggaaagtgggaagaggatcggggtggctgtgcagcagtggcgaaactgg
atgctgcagctgagcacgtacctcactcaccagaacggaagtatcatggaaggcttagca
ttatggaagaataatgtagacaaacggtttgaaggtgttgaagattgtatgatctgcttc
tcagttattcatggtttcaactattctcttcccaaaaaagcctgtagaacatgcaagaaa
aagtttcactcagcttgcctgtacaaatggtttacatctagcaacaagtccacttgcccg
ctctgccgtgagacctttttctga

  All links  
Gene (37)   
   RefGene (29)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (4)   
   OC (1)   
Protein sequence (5)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (3)   
DNA sequence (29)   
   RefSeq(nuc) (5)   
   GenBank (12)   
   EMBL (12)   
Protein domain (12)   
   Pfam (12)   
All databases (83)   

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