KEGG   Mus musculus (house mouse): 80743
Entry
80743             CDS       T01002                                 
Symbol
Vps16, 1810074M16Rik, mVPS16
Name
(RefSeq) VSP16 CORVET/HOPS core subunit
  KO
K20180  vacuolar protein sorting-associated protein 16
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu04140  Autophagy - animal
mmu04148  Efferocytosis
mmu05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    80743 (Vps16)
   04148 Efferocytosis
    80743 (Vps16)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    80743 (Vps16)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:mmu04131]
    80743 (Vps16)
Membrane trafficking [BR:mmu04131]
 Endosome - Lysosome transport
  Tethering complex
   CORVET complex
    80743 (Vps16)
   Hops complex
    80743 (Vps16)
SSDB
Motif
Pfam: Vps16_C Vps16_N
Other DBs
NCBI-GeneID: 80743
NCBI-ProteinID: NP_001349580
MGI: 2136772
Ensembl: ENSMUSG00000027411
Position
2:130265744..130286189
AA seq 547 aa
MVVGNAPESIQFVLDEDSYLVPELDGVRIFSRSTHEFLHEVPVASEEIFKIASMAPGALL
LEAQKEYEKESQKADEYLREIQELGQLIQAVQQCIEAAGHEHQPDMQKSLLRAASFGKCF
LDRFPPDSFVHMCQDLRVLNAIRDYHIGIPLTYTQYKQLTIQVLLDRLVLRRLYPLAIQI
CEYLRLPEVQGVSRILAHWACYKVQQKDVSDEDVARAINQKLGDTPGVSYSDIAARAYGC
GRTELAIKLLEYEPRSGEQVPLLLKMKRSKLALSKAIESGDTDLVLLHLKNELNRGDFFM
TLRNQPMALSLYRQFCKHQELDTLKDLYNQDDNHQELGSFHIRASYAAEERIEGRVAALQ
TAADAFYKAKNEFAAKATEDQMRLLRIQRRLEDELGGRFLDLSLHDTVTTLILGGHNKRA
EQLARDFRIPDKRLWWLKLAALADLEDWEELEKFSKSKKSPIGYLPFVEICMKQHNKHEA
KKYASRVGPEQKVKALLLVGDVAQAAEVAIEHRNETELSLVLSHCTGATDGAIADKIQRA
RAQAQKK
NT seq 1644 nt   +upstreamnt  +downstreamnt
atggtggtgggcaatgcgcctgaaagcatccagtttgtgctcgatgaggactcctactta
gtgcctgagcttgatggggtccgcatcttctcccgaagcacccatgagttcctgcatgaa
gtcccagtggccagtgaagagatcttcaaaattgcctcaatggcccctggagcactgctg
ttagaggcccagaaggaatatgagaaagagagccagaaagcagatgagtacctgcgggag
atccaggaactgggccagctgatccaggctgtgcagcagtgcattgaggctgcaggacat
gagcaccagccagacatgcaaaagagtctgctcagggcggcttcatttggaaagtgtttc
cttgacagatttccacctgacagcttcgtgcacatgtgtcaggaccttcgagtgctcaat
gctattagagactaccacattgggatccctctcacctacacccaatacaagcagctcacc
atccaggtgctgctagacaggcttgtgttgcggaggctttatcccctggctatccagata
tgcgagtacctgcgccttcctgaagtccagggtgtcagcaggatcctagcccactgggcc
tgctacaaggtgcagcagaaagatgtctcagatgaagatgtagcacgggctattaatcag
aagctgggtgacacgcctggtgtttcatactctgacattgctgcgagggcctatggctgt
ggccgcactgaactggccattaagctgctggagtatgagccacgctcaggggagcaggta
cctcttctcctaaagatgaagaggagcaaactggcactgagcaaggctattgagagtgga
gacactgacctggtgttgctgcacctaaagaatgaactcaaccgaggagactttttcatg
actctccggaaccaacccatggccctgagtttgtatcgacagttctgtaagcatcaggag
ctagacactctgaaggacctttacaatcaggacgacaatcaccaggagttgggcagcttc
cacatcagagccagctatgccgctgaagagcgtattgaagggcgagtggcagctctgcag
acggcagctgatgccttctacaaagccaagaatgaatttgcagccaaggccacagaggat
caaatgaggctcctgcggatacagcgacgcctagaggatgagctagggggcaggttccta
gacctatctctacacgacactgtcaccactcttatccttggaggccacaacaagcgggca
gagcagctggcacgtgactttcgcatccctgataagagactatggtggttaaagctggct
gccctggcagatttggaagattgggaggagctggagaagttttccaaaagcaagaaatca
ccgattggttacctgccctttgtagagatctgcatgaaacagcataacaaacatgaggcc
aagaagtatgcttcccgtgtgggccctgaacaaaaggtcaaggctttgcttcttgttggg
gatgtggctcaggctgcagaggtggctattgagcaccggaatgaaacagagctgagcctc
gttttgtcccactgcactggagccacagatggggccatagctgacaagattcagcgggcc
agggcacaagcccagaagaagtga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (1)   
   OC (1)   
Protein sequence (4)   
   RefSeq(pep) (4)   
DNA sequence (33)   
   RefSeq(nuc) (9)   
   GenBank (12)   
   EMBL (12)   
Protein domain (2)   
   Pfam (2)   
All databases (58)   

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