KEGG   Mus musculus (mouse): 94216Help
Entry
94216             CDS       T01002                                 

Gene name
Col4a6, BB116301
Definition
(RefSeq) collagen, type IV, alpha 6
  KO
K06237  collagen, type IV, alpha
Organism
mmu  Mus musculus (mouse)
Pathway
mmu04151  PI3K-Akt signaling pathway
mmu04510  Focal adhesion
mmu04512  ECM-receptor interaction
mmu04926  Relaxin signaling pathway
mmu04933  AGE-RAGE signaling pathway in diabetic complications
mmu04974  Protein digestion and absorption
mmu05146  Amoebiasis
mmu05165  Human papillomavirus infection
mmu05200  Pathways in cancer
mmu05222  Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04151 PI3K-Akt signaling pathway
    94216 (Col4a6)
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    94216 (Col4a6)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    94216 (Col4a6)
 09150 Organismal Systems
  09152 Endocrine system
   04926 Relaxin signaling pathway
    94216 (Col4a6)
  09154 Digestive system
   04974 Protein digestion and absorption
    94216 (Col4a6)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    94216 (Col4a6)
  09162 Cancer: specific types
   05222 Small cell lung cancer
    94216 (Col4a6)
  09167 Endocrine and metabolic disease
   04933 AGE-RAGE signaling pathway in diabetic complications
    94216 (Col4a6)
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    94216 (Col4a6)
  09174 Infectious disease: parasitic
   05146 Amoebiasis
    94216 (Col4a6)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:mmu04147]
    94216 (Col4a6)
   00536 Glycosaminoglycan binding proteins [BR:mmu00536]
    94216 (Col4a6)
Exosome [BR:mmu04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   94216 (Col4a6)
Glycosaminoglycan binding proteins [BR:mmu00536]
 Heparan sulfate/Haparin
  Extracellular matrix molecules
   94216 (Col4a6)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: Collagen C4
Motif
Other DBs
NCBI-GeneID: 94216
NCBI-ProteinID: NP_444415
MGI: 2152695
Ensembl: ENSMUSG00000031273
Vega: OTTMUSG00000018922
UniProt: B1AVK5 Q9ESQ1
Position
X; X F1-F2
AA seq 1691 aa AA seqDB search
MHPGLWLFLVSLCLTKELAESGQKMSYGKPCGSRDCHGVCTCFPEKGARGHPGPIGTQGP
AGPEGFTGPTGLSGLKGERGSPGPLGPYGSKGDKGPIGVPGFVGISGIPGHPGQPGPRGP
PGPDGCNGTQGAVGFPGPDGYPGILGPPGLPGHKGAKGEPVPFQGSITGIRGDPGLPGLD
GIPGPSGSSGSPGDAGPIGPPGLQGPPGLPGLPGPEGNMGLGFQGEKGVKGDVGLPGPAG
PPPSTGELEFMGFPKGKKGSKGEPGPPGFPGMSGPPGVPEFGSTGEKGEKGILGLPGPRG
PMGSEGIQGHPGRQGKKGTSGFPGINGFPGIKGEKGDIGVRGPDSFTDADGAVISGYPGD
PGVLGLPGLRGDEGVQGQRGPSGTPGLPSLTGLPGALGPQGFPGLKGDQGNSGRTTFGEA
GLPGRVGLPGLPGLPGPSGPPGRTFETGHLSNIEPGFPGLQGEQGPKGHQGLKGVKGDSG
FCACEGGAPNIGPHGEPGLPGIQGPIGLQGFKGTKGDPGSRGASGPAGTPGLFGPRGQTG
LKGKKGEPTVSRGSKMSGDKGDPGPQGTPGLAGTPGKDGRPGLPGLPGIQGDGGSGFPGE
RGLPGLPGEKGHDGPIGPPGIGLPGPPGPRGLPGDKGVDGLPGQQGLRGAQGVTLPCIIP
GSYGPSGFPGAPGFPGSKGARGLPGIPGKPGTHGSKGGPGSPGLMHLPGLPGFPGVRGEK
GLPGFPGLPGKDGYPGKAGSPGLPGFKGAAGDIFGAENGASGEQGLQGLPGDKGFPGDSG
LPGPKGLNGKPGMLGPKGERGNPGTSGPPGQPGPSGSTDPFGIKGTSGFPGAPGLPGISG
HPGKKGQRGDIGQPGSTGKRGLPGIKGLPGPQGSPGFLGSPGLSGVTGLPGIEGQKGEKG
SSGPVGFPGLPGLPGLPGADGLKGFSGSFGKVGQPGQTGTSGEKGDRGDPGPVGISSPRP
PMLNLWFKGEKGSRGSAGSDGFPGPRGDKGEPGIPGLPGPPGATGQTNTIKGLNGRPGSP
GSMGRRGLPGLKGSLGIAGFPGMPGKSGSQGLTGTSGLLGATGIPGLKGDQGQTLGISGS
PGPKGQPGELGFKGVKGKDGLVGDRGYPGNKGDGGKVGITGDPGFPGSPGLQGISGMNGD
PGLPGSSGHLGSIGRPGPSGLIGPKGFPGAPGLHGLNGLPGTKGTHGTPGASITGVPGPA
GLPGPKGERGVPGIVIGDPGKQGSKGQKGDQGSPGLQGPAGTPGAPGISLPSVIAGQPGD
PGRPGLDGERGRPGPPGPPGPPGPSSDQGDPGDSGFPGIPGLQGFKGNQGLPGFSGLSGE
LGLKGMRGEPGLMGTPGKIGQPGDPGFPGMKGKAGPRGFSGPQGAPGHTPIAEAMQVPPG
PLGLPGIDGIPGLIGDPGSQGSVGLQGSKGLPGIPGKDGPSGLPGPSGILGDPGLPGLQG
PPGFEGAPGNQGPIGQPGMPGHGVRVGYTLVKHSQSEQVPLCPTGMSRLWVGYSLLFVEG
QEKAHNQDLGFAGSCLPRFSTMPFIYCNINEVCHYARRNDKSYWLSTTAPIPMMPVGQTQ
IPQYISRCSVCEAPSQAIAVHSQDIIVPQCPLGWHSLWIGYSFLMHTAAGAEGGGQSLVS
PGSCLEDFRATPFIECSGARGTCHYFANKYSFWLTTVEERGQFREEPVSETLKTGQLHTR
VSRCQVCMKTP
NT seq 5076 nt NT seq  +upstreamnt  +downstreamnt
atgcaccctggattgtggctgttcctggtttccttatgcttgaccaaagaactggcagaa
tcgggacagaagatgtcctatggaaagccatgtgggagccgagattgccatggagtctgt
acatgctttcctgagaaaggagcaagagggcaccctggaccaattggaactcaaggtcca
gccggtccggaagggtttactggtccaactggtttatcaggtttgaaaggagaaagaggc
tccccaggccctctgggaccatatggatcaaaaggagataagggtcccattggagttcct
ggctttgttggcatcagtggtattccgggccaccctggacagccaggtccaagaggtcca
cctggcccagatggctgtaatggaactcaaggagctgttggatttccaggccctgatggc
taccctgggattttaggaccacctgggctgcctggtcacaaaggtgccaaaggagagcct
gttccttttcaaggcagcattacaggaataaggggagatcctgggctgcctggactagat
ggaatccctggtccatcaggatcctccggctctcctggagatgcaggacccataggacca
ccaggcttacaaggtcccccaggcctccccggacttcccggtcctgagggaaatatgggg
ttaggtttccaaggagaaaaaggagtcaagggggatgttggcctccctggccctgcagga
ccacctccatctactggggaactagaattcatgggattccccaaaggaaagaaaggttcc
aagggtgagccagggcctccaggtttcccaggaatgagtggccctccaggtgtcccggaa
tttggatctactggagaaaaaggagaaaaggggattcttggtttgccaggacctaggggt
cccatgggttcagaaggaatacaaggccatccagggagacagggaaagaaggggacttca
ggttttcctgggattaacgggttcccaggaattaagggtgaaaagggagacattggtgtt
cgaggcccagacagtttcactgatgcagatggcgctgtgatctcaggttatcctggagac
cctggtgtgctgggccttccaggccttagaggagatgaaggcgtccaaggccaacgtggc
ccttctggaacccctggcctcccatcattaacaggtcttccaggtgccctagggcctcag
ggatttcctggcctgaaaggagaccaaggaaactcaggacgtaccacctttggagaagct
ggcctacctggcagggttggtttaccaggtttaccaggcctgccaggcccatcaggccca
cctggtcgcacatttgagactggacatctgtccaacatagagcctgggttccctggtctc
caaggagaacaaggtccaaaaggacatcaaggcctcaaaggagtaaaaggagactctggt
ttttgtgcttgtgaaggtggtgcccccaacattggaccacatggggaaccaggtctgcct
gggatacaaggtcccattggtctacagggttttaaggggactaaaggagatccaggctca
aggggagcatctggtcctgcagggacgccagggctatttggacctagaggtcagactggc
ctcaaaggaaagaaaggagaaccaactgtcagtagaggatcaaaaatgtcaggggacaaa
ggtgaccctggtcctcagggtaccccaggtttggcaggaactccgggcaaggatggaaga
ccaggtttaccaggcctcccaggcattcagggagatggtgggtctggcttcccaggtgaa
agagggttaccaggacttcctggtgaaaaaggccatgatggtccaattggaccaccagga
attgggctgccaggacctcctgggccccgtggacttcctggagataaaggagtagatggg
ttaccagggcaacaaggcctccgtggagctcaaggagtcaccttgccttgtatcattcct
gggtcatatggtccatcaggatttcctggagctcctggattcccaggctctaagggagct
cggggcctccctggaattccaggcaagcctggcactcacggaagcaaaggagggcctggg
agtccagggttaatgcatctcccaggattgccagggtttcctggagttcgtggggagaag
ggattacctgggtttcctgggcttcctggaaaagatggctaccctgggaaagctggcagt
ccagggttaccaggtttcaagggagctgctggtgacatatttggtgctgaaaatggtgct
tcgggggagcaaggcctacagggattgccaggggacaaaggatttcctggagactctggc
cttccaggacccaagggtttgaatgggaaacctggtatgctaggccccaagggtgagcgg
ggcaaccctggaacatcaggaccaccaggacagccaggaccctcagggtctactgaccca
tttggcatcaagggcacatctggattcccaggagcaccaggccttccaggcatctcaggg
caccctggaaagaaaggtcaaagaggagacataggtcagcctggatcaactggaaaaaga
ggtctacctgggataaaaggccttcctggtcctcaagggtcacctggcttcctggggagc
ccaggtttgtcaggcgtcactgggttgccgggcatcgaaggccaaaagggtgaaaagggg
tcctctggaccagtaggatttcctgggttacctggtcttcctggtcttcctggagctgat
ggattaaagggattttctgggtcatttggaaaggtgggacaacctggacagactggtact
tccggagaaaaaggagacagaggggatccagggccagttggcatatctagtccaagacct
ccaatgctaaacctttggttcaaaggagaaaaaggctctcgaggttctgctggatcggat
ggatttcctgggcccagaggtgacaaaggagagcctggcatcccagggttaccaggtcca
cctggagctactggacaaaccaataccatcaaagggctcaatgggaggccaggttctcct
ggatctatgggaagaaggggattacctggcctgaaggggtctcttgggattgcaggtttc
ccaggaatgccagggaaaagcggttcacaggggctcactgggacttctggcctcctggga
gcaactggtatcccaggtttaaaaggagatcaaggccaaacacttggcatttctggaagc
ccaggacccaagggacagcctggagaattaggttttaaaggtgtcaaaggaaaagatgga
ctagttggtgatagaggttacccaggaaacaaaggtgatggtggaaaagttggaattact
ggagatcctggcttccctggctccccaggacttcaagggatttcaggtatgaatggagac
ccaggcctcccaggttcctctggccatctggggtcaattggccgccctggaccctcaggc
ttaataggacctaaaggattccctggagctcctggtttacatggactgaatggacttcca
ggcaccaagggcacccatggcactccaggagccagtatcactggtgttcctgggccggct
ggcctgcctggtcccaaaggggaaaggggagtgccaggaattgtcatcggagatccaggg
aaacaaggttcaaagggacaaaaaggtgaccaaggttccccaggtcttcaaggtcctgct
ggtacccctggagccccaggcatctccttgccctcagtcatagcaggacagcctggtgac
cctgggcggccaggcctagatggagaacgaggccgcccaggccctccaggtcctccaggt
ccccctgggccatcctcagatcaaggcgatcctggagactctggcttccctgggattcca
ggccttcaagggttcaagggaaaccaaggacttccaggtttctctggcctctctggagag
ctagggctaaagggcatgagaggggaacctggcctcatggggactcctggcaagatcggg
caaccaggagacccaggatttcctgggatgaaggggaaggcggggccaagaggcttttcc
ggcccacagggagctccaggacacacaccaattgctgaagctatgcaggttcctccagga
cctttgggtctgccaggcattgatggtatcccaggcctcataggagaccctgggtctcaa
ggctctgtgggtctgcaaggttccaaaggcctacctggcatccctggtaaggatggcccc
agtgggcttccaggcccatctggaatccttggtgatcctggtctccctggactacaagga
cctccaggatttgaaggagctccgggaaatcagggccccattgggcagcctgggatgcct
gggcacggtgtgagagtgggctacacactagtaaaacacagtcagtcagaacaggtgcca
ctatgccccactgggatgagccggctctgggtgggttacagcttgctcttcgtggagggg
caggagaaagcccataaccaggatctgggatttgctggctcctgcctgccccgattcagc
accatgcccttcatatactgcaacatcaatgaagtgtgccactatgccagacgcaatgat
aaatcttactggctctccactactgcccccattcccatgatgcctgtgggccagacccag
attccccagtatatcagccgctgctctgtatgtgaggcaccctcacaagccattgctgta
cacagtcaggacatcattgtcccacagtgccctctgggctggcacagcctctggatcgga
tactccttcctcatgcacactgctgctggggctgagggtggaggccagtccctagtctcc
cctggctcgtgtcttgaggacttccgggccactcctttcattgagtgcagcggcgcccgt
ggtacatgccactactttgccaacaagtacagtttctggctgacaacggtggaggagaga
gggcagtttcgggaagagcccgtgtctgagacgctgaaaactgggcagcttcacaccagg
gtgagccgctgccaggtgtgtatgaaaaccccgtag

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