KEGG   Mus musculus (house mouse): 94232
Entry
94232             CDS       T01002                                 
Symbol
Ubqln4, A1Up, A1u, CIP75, UBIN
Name
(RefSeq) ubiquilin 4
  KO
K04523  ubiquilin
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu04141  Protein processing in endoplasmic reticulum
mmu05014  Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    94232 (Ubqln4)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    94232 (Ubqln4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:mmu04131]
    94232 (Ubqln4)
   03051 Proteasome [BR:mmu03051]
    94232 (Ubqln4)
Membrane trafficking [BR:mmu04131]
 Autophagy
  Chaperone mediated autophagy (CMA)
   Selective cargos
    94232 (Ubqln4)
Proteasome [BR:mmu03051]
 Eukaryotic proteasome
  Proteasome interacting proteins (PIPs)
   UBL-UBA shuttle proteins
    94232 (Ubqln4)
SSDB
Motif
Pfam: ubiquitin STI1-HOP_DP UBA Rad60-SLD YukD Ubiquitin_5 UBA_7 HOIP-UBA Rad60-SLD_2 Dsc3_N CUE
Other DBs
NCBI-GeneID: 94232
NCBI-ProteinID: NP_277068
MGI: 2150152
Ensembl: ENSMUSG00000008604
UniProt: Q99NB8
Structure
Position
3:88460984..88477032
AA seq 596 aa
MAEPSGAETRPQIRVTVKTPKDKEEIVICDQASVKEFKEEISRRFKAQQDQLVLIFAGKI
LKDGDTLSQHGIKDGLTVHLVIKTPQKAQDPVTAAASPPSTPDSASAPSTTPASPAAAPV
QPCSSGNTTSDAGSGGGPSPVAAEGPSSATASILSGFGGILGLGSLGLGSANFMELQQQM
QRQLMSNPEMLSQIMENPLVQDMMSNPDLMRHMIMANPQMQQLMERNPEISHMLNNPELM
RQTMELARNPAMMQEMMRNQDRALSNLESVPGGYNALRRMYTDIQEPMFTAAREQFGNNP
FSSLAGNSDNSSSQPLRTENREPLPNPWSPSPPTSQAPGSGGEGTGGSGTSQVHPTVSNP
FGINAASLGSGMFNSPEMQALLQQISENPQLMQNVISAPYMRTMMQTLAQNPDFAAQMMV
NVPLFAGNPQLQEQLRLQLPVFLQQMQNPESLSILTNPRAMQALLQIQQGLQTLQTEAPG
LVPSLGSFGTPRTSVPLAGSNSGSSAEAPTSSPGVPATSPPSAGSNAQQQLMQQMIQLLS
GSGNSQVPMPEVRFQQQLEQLNSMGFINREANLQALIATGGDINAAIERLLGSQLS
NT seq 1791 nt   +upstreamnt  +downstreamnt
atggcggagccgagtggggctgagacgaggccccagattcgggtcaccgtcaagaccccc
aaggacaaggaggagatcgtgatctgcgatcaagcctcggtcaaggagttcaaggaggag
atctcccggaggtttaaggctcagcaggatcagctggtcctgatcttcgcaggcaagatc
ctcaaggatggggacaccctgagccagcacggcatcaaggatgggctcacagtccaccta
gtcatcaaaacccctcagaaggctcaagatccagtgactgctgctgcttctcctccatcc
actcctgactctgcctctgcaccctccaccacgcctgcctcacctgccgccgcccctgtc
cagccctgcagctctggcaatacaacttcagatgctggcagtggaggggggccctctcca
gtggctgcagaggggccctcaagtgctactgcatcgatcctctctggcttcggaggcatc
ctgggactgggcagcctgggcctgggctccgccaactttatggagctgcagcaacagatg
cagagacagctcatgtccaatcctgagatgctgtcgcagatcatggagaaccccttggtc
caggatatgatgtcaaaccctgatctgatgcgccacatgatcatggctaatccccagatg
cagcagctgatggagaggaaccccgagatcagccacatgctcaacaacccagagctcatg
aggcagacaatggagcttgctcgtaacccagccatgatgcaagaaatgatgcggaaccag
gaccgggccctcagcaacctggaaagtgtcccgggagggtataatgccctccgccgcatg
tacacggacatccaggagcccatgttcactgctgctcgggaacagtttggcaacaatccc
ttctcttccctggccgggaactccgacaactcatcctcccaacctcttcggactgagaat
cgagagcccctccctaacccctggagcccctcgccccccacctcccaggcccccgggtcc
ggtggggagggcaccggaggatcggggaccagccaggtgcacccgacagtctcgaacccc
tttgggatcaatgcggctagcctggggtcagggatgttcaacagcccagaaatgcaggcg
ctcctccagcagatttctgaaaacccccagctgatgcagaatgtcatctcagccccttac
atgcgcaccatgatgcagacgcttgcccagaaccctgactttgctgctcagatgatggtg
aatgtgccgctgttcgcagggaatccacagcttcaggagcagctccgcctgcagctcccc
gtgtttctgcagcagatgcaaaacccagagtctctctccatcctcaccaatccccgggcc
atgcaggccctgctgcagatccagcagggactacagaccctccagactgaagcccctggg
ctggtacccagccttggctcctttgggacaccccggacctcggtacctctggcaggcagc
aactctggatcttcggcagaggcccccacttcttccccgggcgtgccagccacatctcct
cccagtgcgggttccaatgcccagcaacaactcatgcagcagatgatccaacttttgtcc
ggaagtgggaactcacaggtgccgatgccagaagtgagatttcaacagcagctggaacaa
ctcaactccatgggctttattaaccgtgaggccaacctacaggccctgatcgccacagga
ggggacatcaatgccgctattgagagactcctgggctcccagctctcctga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (18)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (1)   
   OC (1)   
Protein sequence (7)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (5)   
DNA sequence (48)   
   RefSeq(nuc) (6)   
   GenBank (21)   
   EMBL (21)   
3D Structure (1)   
   PDB (1)   
Protein domain (11)   
   Pfam (11)   
All databases (91)   

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