KEGG T02177: MYCMA

Mycobacteroides abscessus subsp. massiliense GO 06: MYCMA_2007

Entry

MYCMA_2007        CDS       T02177

Name

(GenBank) pseudouridine synthase

K06177

tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]

Organism

mmv Mycobacteroides abscessus subsp. massiliense GO 06

Brite

KEGG Orthology (KO) [BR:mmv00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:mmv03009]
    MYCMA_2007
   03016 Transfer RNA biogenesis [BR:mmv03016]
    MYCMA_2007
Enzymes [BR:mmv01000]
5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.28  tRNA pseudouridine32 synthase
     MYCMA_2007
    5.4.99.29  23S rRNA pseudouridine746 synthase
     MYCMA_2007
Ribosome biogenesis [BR:mmv03009]
Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    MYCMA_2007
Transfer RNA biogenesis [BR:mmv03016]
Prokaryotic type
  tRNA modification factors
   Psudouridine synthases
    MYCMA_2007

SSDB

Motif

Pfam:

PseudoU_synth_2 fvmRadSAM-pep

Other DBs

NCBI-ProteinID:

AFN64139

Position

1234996..1235850

AA seq 284 aa
MRDGLGPVRIRLHDGGRVVDELAARFGPAAVDQVVRGEVVDSAGERVTAGTRLPAGAVVY
TYREPAEEISVPFAIDVLHWDENVLVVDKPHFLATMPRGRHVTETALVRLRKMLDLPELA
PAHRLDRLTAGVLLFTVRRDVRSAYHALFAQRQVVKIYEALAPVKPGLSLPLTLRSRIVK
RRSILQAVEEPGPVNAETRVELVDRHDAVGRYRLTPSTGQTHQLRVHMNSMGVPILNDPL
YPDVVELPPDDFTRPLQLLARTLAFRDPLNGKDVRYESGRALGQ

NT seq 855 nt +upstreamnt +downstreamnt
gtgcgagacggtttggggccggtgcgaatccggcttcacgacggcggacgagtggttgac
gagctggcggcccgattcggtccggccgctgtcgatcaggtggtccgcggcgaggtggtc
gattccgcgggcgagcgcgtcaccgccggaacccggctgcccgccggtgccgtcgtgtac
acgtatcgcgaaccggccgaggagatttccgtacctttcgccatcgatgtattgcattgg
gacgagaatgtcctggtggtcgacaagccgcattttcttgccaccatgccgcgtgggcgc
cacgtcaccgagacggcgctggtgcggttgcgcaagatgcttgatctgccggagctggca
cccgcgcatcggctggaccgtctcaccgcgggcgtgctgctgttcaccgtgcgccgcgat
gtgcgttcggcgtatcacgcgttgttcgcgcagcggcaagtcgtgaagatctatgaggcg
ttggccccggtcaagcccggactatccctgccgctgacgctgcgcagcaggatcgtcaag
cggcgcagcattcttcaggcagtggaggaaccggggccggtgaacgccgagacgcgcgtc
gagctggttgaccgccatgacgcggtgggcaggtatcgcctgactcctagcaccggtcaa
acacatcaattgcgcgtgcacatgaacagcatgggtgtcccgatactcaatgacccgctt
tatccggacgtcgtcgagctgccgcccgatgacttcacgcgtccattgcagctgttggcg
cgcaccttggcgttccgggacccgttgaatggcaaggacgttaggtacgagtccggccgg
gcgctagggcagtga

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (12)   

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