KEGG   Mycoplasma mycoides subsp. mycoides SC PG1: MSC_0045
Entry
MSC_0045          CDS       T00161                                 
Symbol
holB
Name
(GenBank) DNA polymerase III delta subunit
  KO
K02341  DNA polymerase III subunit delta' [EC:2.7.7.7]
Organism
mmy  Mycoplasma mycoides subsp. mycoides SC PG1
Pathway
mmy03030  DNA replication
mmy03430  Mismatch repair
mmy03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:mmy00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    MSC_0045 (holB)
   03430 Mismatch repair
    MSC_0045 (holB)
   03440 Homologous recombination
    MSC_0045 (holB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mmy03032]
    MSC_0045 (holB)
   03400 DNA repair and recombination proteins [BR:mmy03400]
    MSC_0045 (holB)
Enzymes [BR:mmy01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     MSC_0045 (holB)
DNA replication proteins [BR:mmy03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     MSC_0045 (holB)
DNA repair and recombination proteins [BR:mmy03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     MSC_0045 (holB)
SSDB
Motif
Pfam: DNA_pol3_delta2 DUF1796 KIP1 AAA_22
Other DBs
NCBI-ProteinID: CAE76698
UniProt: Q6MUI6
Position
complement(55398..56138)
AA seq 246 aa
MKKEQVISRLKKLIDNNSLFSNIILNCKDEQTSWDVIYQIIYYAFNKNVKDLDFNKLKDQ
IQNNTHVDILTIGNNINITNQEILDLINKMSLSATATQNIKFFIIKNAQNLKLSAANSLL
KFLEEPPINTYGILLTNNYSEIINTIWSRCQLINIDNQTQLDNKLNRFEELLISKNKDEI
LLFNKEMKTMNKNELVKLIDDAYNRTIIYQFANLISCTLEILDDLKFLPLTNIAIDNYLI
RIVEQI
NT seq 741 nt   +upstreamnt  +downstreamnt
atgaaaaaagaacaagtaattagtagattaaaaaaactaattgataataatagcttattt
tcaaacattattttaaattgtaaggatgaacaaactagttgagatgttatttatcaaatt
atttattatgcttttaataagaatgtaaaagatcttgattttaataaattaaaagatcaa
atccaaaataacacacatgttgatatactaactattggaaataatattaatataacaaat
caagaaatattagatctaattaataaaatgtctttatcagcaactgcaacacaaaatatt
aagttttttataattaaaaatgctcaaaatcttaaattaagtgctgctaattctttatta
aaatttttagaagaaccacctattaatacttatggaattttactaactaataattatagt
gaaattattaatactatttgatcacgttgtcagttaattaatatagataatcaaactcaa
ttagataacaaacttaacagatttgaagaattattaatatctaaaaataaagatgagatt
ttattatttaataaagaaatgaaaaccatgaataaaaatgaattagttaaattgattgat
gatgcatataatagaactattatttatcaatttgctaatttgattagttgtactttagaa
atactagatgatttaaaatttttaccacttacaaacatagctatagataattatttaatt
agaattgtagaacaaatttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (17)   

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