KEGG   Mycolicibacterium neoaurum VKM Ac-1815D: D174_02240
Entry
D174_02240        CDS       T02959                                 
Name
(GenBank) RNA polymerase sigma factor SigM
  KO
K03088  RNA polymerase sigma-70 factor, ECF subfamily
Organism
mne  Mycolicibacterium neoaurum VKM Ac-1815D
Brite
KEGG Orthology (KO) [BR:mne00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mne03021]
    D174_02240
Transcription machinery [BR:mne03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     D174_02240
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_ECF Sigma70_r4 HTH_28 Terminase_5 DUF134 HTH_16 HTH_23 HTH_17 MerR-DNA-bind Xre-like-HTH
Other DBs
NCBI-ProteinID: AHC23483
UniProt: V5X6N9
Position
complement(461219..461779)
AA seq 186 aa
MGDITADDRTDEQLLTAHLAGDRFAFEELFRRYEPQLYRLARITTRCPDDARDALQEAML
SAHCAAGQFRHDCTVKSWLRRIVVNACLDRLRRHRARPTAPLDPELAGHAPDPTTALDTA
IVVEKALMRLPIDQRAAIVAVDMQGFSVAETAALLGVPEGTVKSRCARGRSKLAATLAHL
SASVAR
NT seq 561 nt   +upstreamnt  +downstreamnt
gtgggggatatcacggcggacgaccgcactgacgaacaattgctgaccgcgcatctcgcc
ggggatcggttcgctttcgaggagctgttccgccgctacgagccgcagctgtaccggctg
gcacggatcaccacccgctgtcccgacgacgcccgcgatgccttgcaggaagcgatgctc
tcggcacactgcgcggccggtcagttccgtcatgactgcacggtgaagagctggctgcgc
cgcatcgtggtgaacgcctgcctggaccggctgcgacggcacagggcgcgacccaccgcg
ccgctggatccggaactcgccggccatgccccggaccccaccacggcattggacaccgcg
atcgtggtggagaaggcgttgatgcggcttccgatcgaccagcgcgcggcgatcgttgcc
gtcgatatgcaggggttctcggtggccgagacggccgccctgctcggtgtgccagagggc
accgtgaagagtcggtgcgcgcgcggccggtccaaactcgcggcgaccctggcccacctg
agcgcatcggtggcgcgatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (12)   
   Pfam (12)   
All databases (19)   

Download RDF
DBGET integrated database retrieval system