KEGG   Mycolicibacterium neoaurum VKM Ac-1815D: D174_17380
Entry
D174_17380        CDS       T02959                                 
Name
(GenBank) RNA polymerase sigma factor
  KO
K03088  RNA polymerase sigma-70 factor, ECF subfamily
Organism
mne  Mycolicibacterium neoaurum VKM Ac-1815D
Brite
KEGG Orthology (KO) [BR:mne00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mne03021]
    D174_17380
Transcription machinery [BR:mne03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     D174_17380
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4_2 Sigma70_r4 Sigma70_ECF
Other DBs
NCBI-ProteinID: AHC26223
UniProt: V5XEH4
Position
3635993..3636538
AA seq 181 aa
MLDSLSDETLARRAQRGDSAAFDVLVVRHAPALLKFVRQTYPESGDCDDIVQETFIAAWK
ALPNFAFRSAFRTWLYSLASRKTVDAMRRRRPQNDLDSAPETPDFRPGPGQRAEHAAFLT
TLNRELAKLPYPARAAWWLREVYDLPVAEIATVLHTTEGSVRGLLQRTRKRLATTLEEFR
P
NT seq 546 nt   +upstreamnt  +downstreamnt
gtgctcgactcgctgtccgatgagacgctcgcccgacgcgctcagcggggtgattcggca
gcgttcgacgtgttggtcgtccggcatgcaccggcgttgctgaagttcgtcaggcaaacg
tatccggagtccggcgactgcgacgatatcgtccaggagaccttcatcgccgcatggaag
gcgctgcccaacttcgcattccgttccgcgttccgaacgtggctgtactccttggcgtct
cgcaagaccgtcgatgcgatgcgccgccggcgaccacagaacgatctggactcggcgccg
gagacccccgacttccgacctgggcccggccagcgggccgagcacgccgcgttcttgacg
accctgaaccgcgaactggccaagctgccctacccggcgcgcgccgcgtggtggctccgc
gaggtctatgacctgccggtggccgaaatcgccacggtgctgcacacgaccgagggttcg
gtccgaggattgttgcagcgcacccggaaacgtctggccaccacactggaggagttccga
ccatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (11)   

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