KEGG   Monoraphidium neglectum: MNEG_6032
Entry
MNEG_6032         CDS       T05028                                 
Name
(RefSeq) TATA-box-binding protein
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
mng  Monoraphidium neglectum
Pathway
mng03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:mng00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    MNEG_6032
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:mng03000]
    MNEG_6032
   03021 Transcription machinery [BR:mng03021]
    MNEG_6032
Transcription factors [BR:mng03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    MNEG_6032
Transcription machinery [BR:mng03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     MNEG_6032
  RNA polymerase III system
    TFIIIB
     MNEG_6032
  RNA polymerase I system
    SL1/TIF-1B
     MNEG_6032
SSDB
Motif
Pfam: TBP DUF3378
Other DBs
NCBI-GeneID: 25738908
NCBI-ProteinID: XP_013900948
UniProt: A0A0D2L432
Position
Unknown
AA seq 399 aa
MAGASGDSVAALVNLTNAVNTGDDVALALASGAADIAAGGAGAAEPEVDRTKHPSGIVPV
LQNVVATVNLGCKLDLKEIALHARNAEYNPKRFAAVIMRIREPKTTALIFGSGKMVCTGA
KSEQESKLAAKKYCRIIQRLGFEAEFKEFTIQNVVASCDVKFPIRLEGLQYSHAYFATYE
PELFPGLIYRMKQPKIVLLIFVSGKVVLTGAKKRDDIYTAFENIYATLQEFKKKGPTEGM
QQLAAPGNAAALPAPPGAAGGTGAGPSGSGSGAAGGGGGGAGSSGRGAMPPPAAGMMPPA
RRAPGGPAPPAAAAAAAAGPSSGAAGGGEHGVPPATPSHVPPATPAYMPPSTPAYQPPPA
TPAYVPPATPAYQAPTALPTLPSLAAPKAPVLPSRLPPQ
NT seq 1200 nt   +upstreamnt  +downstreamnt
atggcaggtgcctccggggacagcgtggcggcgcttgtcaacctcaccaacgccgttaac
actggcgacgacgttgctcttgcgctggccagcggcgctgcagacattgctgccggtggc
gcgggtgcagcagagccggaggtcgatcgcacgaagcacccctcgggtatcgtgccggtg
ctgcagaatgtcgtcgcaacagtcaacctcgggtgtaagctggacctgaaagagatcgcg
ctgcacgcgcgcaacgctgagtacaaccccaagcggtttgcggcggtgatcatgcgcatt
cgggaacccaagacgacagctctcatctttgggtctgggaagatggtgtgcaccggcgcc
aagagcgagcaggagtccaagcttgcggctaaaaaatactgccgcatcatccagcgcctg
ggctttgaggcggagttcaaggagttcaccatccagaacgtcgtggcctcctgcgacgtc
aagttccccatccgcctggagggcctgcagtactcacacgcctacttcgccacgtacgag
ccggagctgttcccgggcctgatataccgcatgaagcagcccaagatcgtgctgctcata
ttcgtcagcggcaaggtggtgctgaccggcgccaagaagcgcgacgacatctacaccgcc
tttgaaaacatatacgccacgcttcaggagttcaagaagaagggcccaacagagggcatg
cagcagctagcggcgcccgggaacgcggcagcgctgccagccccgcccggcgccgctggc
ggcacgggcgcggggcccagtggcagcggcagcggcgcggcgggcggaggcggtgggggc
gcaggctccagcggcaggggtgccatgccaccgccagctgcaggcatgatgccaccagcg
cggcgcgcgcctggcgggcctgctcccccggcagcagcagcggcagccgctgcaggccct
tcatccggtgcagccgggggcggcgagcacggcgtgccgcccgccaccccctcgcatgtg
ccgccagcgacgcccgcttacatgccgccctccacccccgcgtaccagcccccgcctgcc
acgcctgcctatgtgccgccggcgaccccggcgtaccaggcgcccacggcgcttcccacg
ctgccgtcactggcagcgccgaaggcgccggtgctgcccagtcggctgccgccgcagtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (65)   
   KEGG ORTHOLOGY (1)   
   RefGene (61)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (75)   

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