KEGG   Methanothermococcus okinawensis: Metok_1233
Entry
Metok_1233        CDS       T01534                                 
Name
(GenBank) Flap structure-specific endonuclease
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
mok  Methanothermococcus okinawensis
Pathway
mok03030  DNA replication
mok03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:mok00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Metok_1233
   03410 Base excision repair
    Metok_1233
   03450 Non-homologous end-joining
    Metok_1233
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mok03032]
    Metok_1233
   03400 DNA repair and recombination proteins [BR:mok03400]
    Metok_1233
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:mok04147]
    Metok_1233
DNA replication proteins [BR:mok03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    Metok_1233
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     Metok_1233
DNA repair and recombination proteins [BR:mok03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     Metok_1233
Exosome [BR:mok04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   Metok_1233
SSDB
Motif
Pfam: XPG_I XPG_N 5_3_exonuc
Other DBs
NCBI-ProteinID: AEH07201
UniProt: F8AJL5
Position
1256566..1257540
AA seq 324 aa
MGVQFNDLIPKKEISLKDLKNKTVAIDSMNILYQFLSSIRLRDGSPLRNSKGEITSTYNG
IFYKNIYMLENDITPIWVFDGKPPELKHKTREERKKVKEKAMEEYISAKEEGNLEDMQKY
AKRINYLEPKVVENSKRLLNLMGIPFINAPSEGEAQCSYMAKKGDVYAVVSQDYDALLYG
APRTVRNITASNKPLELIELDEVLGALNITLDNLIDMAILIGTDYNIGGVKGIGPKKALD
IVKNNKMGEYIKNIENYEVIKNIFKHPKVTDEYSLKLGAPNIEELRKFLIDENNFSENRI
LPSLKKLEKIVNKKKSQTTIESWF
NT seq 975 nt   +upstreamnt  +downstreamnt
atgggagtgcaattcaatgatttaatccctaaaaaagaaatatctttaaaggatttaaaa
aacaaaaccgtagcaatagattctatgaatattttatatcaatttctatcaagtataaga
ttaagggatgggagtccgcttagaaattcaaagggggaaatcacttcaacatacaacggc
atattctataaaaatatatatatgcttgaaaatgatattacacctatatgggtatttgat
ggaaaaccgccagaattgaaacataaaacaagggaagaaagaaaaaaggtaaaagaaaaa
gcaatggaagaatacatctcagcaaaagaagaaggaaatctcgaagatatgcagaaatat
gcaaaaagaattaactatttagagccaaaagttgtggaaaattcaaaaagacttctaaat
ttaatgggcataccattcataaatgcaccatcagaaggagaagctcagtgctcatatatg
gcaaaaaaaggagatgtctatgcagttgtaagtcaggattacgatgctttattatacgga
gctccgagaactgttaggaacatcacagcatcaaacaaaccattggagttaatcgaactt
gatgaggttttaggagctctgaatataacacttgataatcttatagatatggctatatta
ataggaacagattataatataggcggtgttaaaggcataggtccaaaaaaggcattggat
atagtaaaaaataataaaatgggggaatatataaaaaacattgaaaactatgaagttata
aaaaatatatttaaacatccaaaagtaacggatgaatatagtttaaaattaggagctccc
aatattgaagaattaagaaaatttttaattgatgaaaataatttttcagaaaataggata
ttgccatcccttaaaaagttggaaaaaatagttaataagaaaaaaagtcaaaccactatt
gaatcatggttttaa

DBGET integrated database retrieval system