KEGG   Microbacterium oleivorans: BWL13_02521
Entry
BWL13_02521       CDS       T05832                                 
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
  KO
K03043  DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
Organism
moo  Microbacterium oleivorans
Pathway
moo03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:moo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    BWL13_02521 (rpoB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:moo03021]
    BWL13_02521 (rpoB)
   03400 DNA repair and recombination proteins [BR:moo03400]
    BWL13_02521 (rpoB)
Enzymes [BR:moo01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     BWL13_02521 (rpoB)
Transcription machinery [BR:moo03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     BWL13_02521 (rpoB)
DNA repair and recombination proteins [BR:moo03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      BWL13_02521 (rpoB)
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_2 RNA_pol_Rpb2_7 RNA_pol_Rpb2_3 RNA_pol_Rpb2_45 RNA_pol_Rpb2_1
Other DBs
NCBI-ProteinID: AZS44924
UniProt: A0A031FXK4
Position
complement(2566482..2569976)
AA seq 1164 aa
MAAARNASTTTIKNGRGASRLSFAKISDTLEVPDLLALQTESFDWLVGNEAWKARVAEAQ
AEGRTDVPEISGLEEIFEEISPIEDLGETMQLSFTNPYLEPEKYSIEECKERGKTYAAPL
YVEAEFMNHLTGEIKTQTVFMGDFPLQTARGTFIINGTERVVVSQLVRSPGVYFDKTPDK
TSDKDIVSARVIPSRGAWLEFEIDKRDQVGVRIDRKRKQSVTVFLKALGLTTEDIMQEFA
GFSSIEETLEKDTILTKEDALRDIYRKLRPGEQVAAEAARALLDNFYFNSKRYDLAKVGR
YKINQKLGIDKALSDSVLTVEDIVATIKYLVRLHRGDVSYDGVRSGKPAEIRLDVDDIDN
FGNRRIRAVGELIQNQVRTGLSRMERVVRERMTTQDIEAITPQTLINVRPVVAAIKEFFG
TSQLSQFMDQNNPLAGLTHKRRLSALGPGGLSRERAGVEVRDVHPSHYGRMCPIETPEGP
NIGLIGSLASFARINAFGFIETPYRRVVGNKVTDQIDYLTAAEEADYVVAQAGVELKADG
AFVNDRILARRGQGGEVDLFPVDEIGYMDVSPRQMVSVATSLIPFLEHDDANRALMGANM
QRQAVPLLRSESPIVGTGMEGYAAIDAGDVITALKPGVVSEVSADVVTVQLDEGGTQDYF
LRKFDRSNQGTSYNQRVVVSAGDRVEIGEVIADGPATEDGELALGKNLLVAFMTWEGHNF
EDAIILSQELVKNDTLSSIHIEEYEVDSRDTKLGKEEITRDLPNVSPDLLKDLDERGIIR
IGAEVRPGDILVGKVTPKGETELSAEERLLRAIFNEKSREVRDTSLKVPHGEQGTIIAVK
EFNAEDGDDELGSGVNRRVVVYIAQKRKITAGDKLAGRHGNKGVIAKILPVEDMPFMADG
TPVDVVLNPLGIPGRMNFGQVLETHLGWVAKQGWKVEGSPDWAGKLPEQAREAAPGTKVA
TPVFDGAFEEEIAGLLDSTNLTRDGERLIDSSGKAKLFDGRSGDPFPAPISVGYMYILKL
HHLVDDKIHARSTGPYSMITQQPLGGKAQFGGQRFGEMEVWALEAYGAAYALQELLTIKS
DDIVGRVKVYEAIVKGENIQEPGIPESFKVLMKEMQSLCLNVEVLSADGTEVNLRDSDDE
AFRAAEELGINISTRFESTSIDEI
NT seq 3495 nt   +upstreamnt  +downstreamnt
ttggctgctgcgcgcaacgcatctaccaccaccatcaagaacggccgcggagcatcccgc
ctctcgttcgccaagatctccgacacgctggaggttcctgacctcctcgcgctgcagacc
gagtcgttcgattggctcgtcggcaacgaggcatggaaggcacgcgtcgccgaggcgcag
gccgagggacgcaccgacgtccctgagatcagcggcctcgaggagatcttcgaggagatc
tcgccgatcgaggacctgggcgagacgatgcagctctcgttcacgaacccctacctcgag
cccgagaagtactccatcgaggagtgcaaggagcgcggcaagacgtacgccgcacccctc
tacgtcgaggccgagttcatgaaccacctcacgggtgagatcaagacgcagacggtcttc
atgggcgacttcccgctccagaccgcccgaggcaccttcatcatcaacggcaccgagcgc
gtcgtcgtctcgcagctcgtccgttcgcccggtgtctacttcgacaagacccccgacaag
acgtccgacaaggacatcgtctcggctcgcgtcatccccagccgtggtgcgtggctcgag
ttcgagatcgacaagcgcgaccaggtgggcgtccgcatcgaccgcaagcgcaagcagtcg
gtcaccgtcttcctcaaggccctcggcctgacgaccgaagacatcatgcaggagttcgcg
ggcttcagctcgatcgaggagaccctcgagaaggacacgatcctcaccaaggaagatgcg
ctccgcgacatctaccgcaagctccgtccgggcgagcaggtcgccgccgaggctgcccgc
gcgctgctggacaacttctacttcaactcgaagcgctatgacctggccaaggtcggtcgt
tacaagatcaaccagaagctcggcatcgacaaggccctcagcgactcggtcctgaccgtc
gaggacatcgtcgcgacgatcaagtacctcgtgcgtctgcaccgcggcgacgtcagctac
gacggtgtccgcagcggcaagcccgctgagatccgcctggacgtcgacgacatcgacaac
ttcggcaaccgtcgcatccgcgccgtcggcgagctcatccagaaccaggtccgcaccggc
ctgtcccgcatggagcgcgtcgtccgcgagcgcatgaccacgcaggacatcgaggcgatc
acgccgcagaccctgatcaacgtccgccccgtcgtggccgcgatcaaggagttcttcgga
acgtcgcagctgtcgcagttcatggaccagaacaacccgctcgcgggtctgacccacaag
cgtcgcctctcggcgctcggccccggtggtctctcgcgtgagcgtgccggcgtcgaggtc
cgtgacgtccacccctcgcactacggccgcatgtgccccatcgagaccccggaaggcccg
aacatcggcctgatcggttcgctcgcctccttcgcgcgcatcaacgcgttcggcttcatc
gagacgccgtaccgccgcgtcgtgggcaacaaggtcaccgaccagatcgactacctgacg
gcagcggaagaggccgactacgtcgtggctcaggccggtgtcgagctcaaggctgatggt
gcgttcgtcaacgaccgcatcctcgcccgccgcggtcagggtggcgaggtcgacctgttc
cccgtcgacgagatcggctacatggatgtctcgccgcgccagatggtgtcggtcgcgacc
tccctcatccccttcctcgagcacgacgacgcgaaccgcgccctcatgggtgccaacatg
cagcgtcaggctgtcccgctgctgcgcagcgagtcgccgatcgtcggaaccggtatggag
ggctacgccgccatcgacgcgggtgacgtgatcaccgcgctcaagcccggtgtcgtctcc
gaggtgtcggccgacgtcgtcaccgtccagctcgacgagggtggcacgcaggactacttc
ctccggaagttcgaccgctccaaccagggcacgtcgtacaaccagcgcgtcgtggtctcg
gccggcgaccgtgtggagatcggcgaggtcatcgccgatggtcccgccacggaggacggc
gagctcgcgctcggcaagaacctcctcgtcgcgttcatgacgtgggagggtcacaacttc
gaagacgcgatcatcctcagccaggagctcgtcaagaacgacaccctctcctcgatccac
atcgaggagtacgaggtcgactctcgcgacaccaagctgggcaaggaggagatcacccgt
gacctccccaacgtcagccccgacctgctgaaggacctcgacgagcgaggcatcatccgc
atcggtgccgaggtccgccccggcgacatcctcgtcggcaaggtcacgcccaagggcgag
accgagctgtcggccgaggagcgcctgctccgcgcgatcttcaacgagaagagccgcgaa
gtccgcgacacctcgctgaaggtgccccacggtgagcagggcacgatcatcgcagtcaag
gagttcaacgccgaagacggcgacgacgagctcggctccggtgtcaaccgccgcgtcgtg
gtctacatcgcccagaagcgcaagatcaccgcgggtgacaagctcgccggtcgtcacggc
aacaagggcgtcatcgcgaagatcctgcccgtcgaggacatgccgttcatggcggacggt
acccccgtcgacgtcgtcctgaacccgctcggcatccccggtcgaatgaacttcggccag
gtcctcgagacgcacctcggctgggtcgccaagcagggctggaaggtcgaaggttcgccg
gactgggcgggcaagctgcccgagcaggctcgcgaggccgctcccggcacgaaggtcgcc
accccggtgttcgacggcgcgttcgaggaggagatcgcaggtctgctcgactccacgaac
ctgacccgtgacggagagcgtctcatcgacagctccggcaaggcgaagctgttcgacggc
cgttcgggtgacccgttcccggctccgatctcggtcggctacatgtacatcctgaagctg
caccaccttgtcgacgacaagatccacgcacgctcgacgggcccctactcgatgatcacc
cagcagccgctcggcggtaaggcccagttcggtggccagcgcttcggtgagatggaggtc
tgggcgctcgaggcctacggtgccgcatacgcactgcaggagctgctgacgatcaagtcg
gacgacatcgtcggccgcgtcaaggtctacgaagcgatcgtcaagggcgagaacatccag
gagcccggcatcccggagtcgttcaaggtcctcatgaaggagatgcagtccctctgcctg
aacgtcgaggtcctctcggccgacggcaccgaggtgaacctgcgtgacagtgacgacgag
gccttccgtgcagcggaagagctcggcatcaacatctccacccggttcgagtcgacgtcg
atcgacgagatctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

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