KEGG   Mesorhizobium opportunistum: Mesop_5311
Entry
Mesop_5311        CDS       T01542                                 
Name
(GenBank) RNA polymerase, sigma-24 subunit, ECF subfamily
  KO
K03088  RNA polymerase sigma-70 factor, ECF subfamily
Organism
mop  Mesorhizobium opportunistum
Brite
KEGG Orthology (KO) [BR:mop00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mop03021]
    Mesop_5311
Transcription machinery [BR:mop03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     Mesop_5311
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4_2 Sigma70_r4 Sigma70_ECF HTH_psq HTH_28 Xre-like-HTH HTH_23
Other DBs
NCBI-ProteinID: AEH89727
UniProt: F7Y7B2
Position
complement(5412917..5413435)
AA seq 172 aa
MDEKKAAILGEIPRLRRYARSLLRDRDSADDLVQDCLERALLRLENWQTGESPRRWLFTI
MHHLFIDQMRKVNRRGEAAMLPLEAGEAVAQPAEQLEGIASREIINALQAISPDRRAALV
MVAIEGFSYAEAANILGVPAGTLMSRIARGREELRGLLDDTARRRTIRIVEK
NT seq 519 nt   +upstreamnt  +downstreamnt
atggacgaaaagaaggcagcaatccttggcgaaataccgcgcctgcgccgctacgcacgc
tcgcttttgcgcgaccgcgattctgccgacgacctcgtccaggactgcctcgaacgcgca
ctgctgcggctcgagaactggcagacgggagagagccccaggaggtggctgtttacgatc
atgcatcatttgttcatcgaccagatgcgcaaggtgaaccgccgaggcgaggcggcgatg
ctgccgctggaagcgggcgaggcggttgcccagccggccgaacagttggagggcatcgcc
tcacgcgaaatcatcaatgctttgcaggcgatcagccccgatcgccgcgccgcgcttgtc
atggtcgcgatcgagggcttttcctatgccgaagccgccaacattctgggcgtgcccgcc
ggcacgctgatgtcacgcatcgcgcgtgggcgtgaggaattgcgtgggttgctggatgat
acggcgcgccgccgcacgataaggatcgtcgagaaatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (15)   

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