KEGG   Mycobacterium avium subsp. paratuberculosis K-10: MAP_1322
Entry
MAP_1322          CDS       T00156                                 
Symbol
polA
Name
(GenBank) PolA
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
mpa  Mycobacterium avium subsp. paratuberculosis K-10
Pathway
mpa03030  DNA replication
mpa03410  Base excision repair
mpa03420  Nucleotide excision repair
mpa03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:mpa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    MAP_1322 (polA)
   03410 Base excision repair
    MAP_1322 (polA)
   03420 Nucleotide excision repair
    MAP_1322 (polA)
   03440 Homologous recombination
    MAP_1322 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mpa03032]
    MAP_1322 (polA)
   03400 DNA repair and recombination proteins [BR:mpa03400]
    MAP_1322 (polA)
Enzymes [BR:mpa01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     MAP_1322 (polA)
DNA replication proteins [BR:mpa03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     MAP_1322 (polA)
DNA repair and recombination proteins [BR:mpa03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     MAP_1322 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     MAP_1322 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc DNA_pol_A_exo1 HHH_5 HHH_2 DNA_pol_lambd_f NYN_YacP
Other DBs
NCBI-ProteinID: AAS03639
UniProt: Q740M8
Position
1412666..1415425
AA seq 919 aa
MPKVRAVPATKAATKTATKTAAGAGEEQNRPTLMLLDGNSLAFRAFYALPAENFKTRGGL
TTNAVYGFTAMLINLLRDEAPTHIAAAFDVSRQTFRSDRYPEYKANRSATPDEFHGQIDI
TKEVLAALGITVLAEPGFEADDLIATLATQAENEGYRVLVVTGDRDSLQLVSDNVTVLYP
RKGVSELTRFTPEAVVEKYGLTPQQYPDFAALRGDPSDNLPGIPGVGEKTASKWIAEYGS
LQALVDNVDSVRGKVGDALREHLASVIRNRELTDLIKDVPLAQTPDTLRLQPWDRDQIHR
LFDDLEFRMLRDRLFETLAAVEPEVDEGFDVRGGALEAGELAVWLAEHSSGKRFGLAVAG
THLAYDADCTALAIVSADGEGRYIDTSALDPDDEAALASWLADPGPPKALHEAKLAMHDL
AGRGWTLAGVTSDTALAAYLVRPGQRSFSLDDLALRYLRRELRAENPQQQQLSLLDDTDG
TDDQAVQTLILRAVAVLDLADALDEELARINSTSLLSGMELPVQRVLAGMENAGIAVDLD
LLSELQSDFAHQIRDAAEAAYAVIGKQINLGSPKQLQAVLFDELQMPKTKRTKTGYTTDA
DALQSLFDKTGHPFLQHLLAHRDATRLKVTVDGLLNSVASDGRIHTTFNQTIAATGRLSS
TEPNLQNIPIRTEAGRRIRDAFVVGDGYAELMTADYSQIEMRIMAHLSQDAGLIEAFNTG
EDLHSFVASRAFGVPIEEVTGELRRRVKAMSYGLAYGLSAYGLSQQLKISTEEAKEQMDA
YFARFGGVRDYLHAVVEQARKDGYTSTVLGRRRYLPELDSSNRQVREAAERAALNAPIQG
SAADIIKVAMIEVDKAIKEAGLRSRILLQVHDELLFEVAAGEREQLEALARDKMGGAYPL
DVPLEVSVGYGRSWDAAAH
NT seq 2760 nt   +upstreamnt  +downstreamnt
gtgcctaaagtgagagccgtgcccgccacgaaagccgcgacgaaaaccgccaccaaaacc
gccgccggggccggcgaggaacaaaaccggccgacactgatgctgctggacggcaactcg
ctggcgttccgggcgttctatgcgctgcccgccgagaacttcaagacccgcggcgggctg
accaccaacgcggtctacggcttcaccgcgatgctgatcaacctgctgcgcgacgaggcc
ccgacccacatcgccgcggccttcgacgtgtcccggcagaccttccgctccgatcgctac
ccggaatacaaggccaaccgctcggcgacccccgacgagttccacggccagatcgacatc
accaaggaagtcctggcggcgctgggcatcacggtgctcgccgagccgggattcgaggcc
gacgacctgatcgccaccctggccacccaggccgagaacgagggctaccgggtgctggtg
gtcaccggcgaccgcgactcgctgcagttggtcagcgacaacgtgacggtgctctacccg
cgcaagggcgtcagcgagctgacccgcttcacccccgaggcggtcgtcgaaaaatacggg
ctgaccccccagcagtaccccgacttcgccgccctgcgcggcgaccccagcgacaacctg
cccggcattcccggtgtgggggagaagaccgcctccaagtggatcgccgaatacgggtcg
ctgcaggcgctggtcgacaacgtcgactcggtacgcggcaaggtcggcgacgcgctgcgc
gaacacctggccagcgtgatccgcaaccgcgagctgaccgatctgatcaaggacgtgccg
ctggcccagacgcccgacacgctgcggctgcagccctgggaccgcgaccagatccaccgg
ctcttcgacgacctggagttccggatgctgcgcgaccggctgttcgaaaccctggccgcg
gtggagcctgaggtcgacgagggtttcgacgtgcgtggcggcgcgctggaagccggcgaa
ctggcggtgtggttggccgagcacagctccggcaagcgcttcgggctggccgtcgccggc
acccacctggcctacgatgccgactgcaccgcgctggccatcgtctccgccgacggcgag
ggccgctacatcgacacctcggcgctggatcccgacgacgaagccgcgctggcgtcctgg
ttggccgaccccggtccgcccaaggcgctgcacgaggccaagctggcgatgcacgacctg
gccgggcggggctggacgctggccggcgtcacctccgacaccgcgctggccgcctacctg
gtgcggcccggtcagcgcagcttctccctcgacgatctcgcactgcgctatctgcgccgc
gagctgcgcgcggaaaaccctcagcagcaacagctttcgctgctggatgacaccgacggc
accgacgaccaggcggtgcagacgctgatcctgcgggcggtggcggtgctggatctggcc
gacgcgctcgacgaggaactggcccgcatcaactccacctcgctgttgagcggcatggag
ctgccggtgcagcgggtgctcgccggaatggaaaacgccggtatcgcagtcgatttggac
ttgctcagcgagttgcagagcgatttcgcccaccagatccgcgacgcggccgaggcggcg
tacgcggtgatcggcaagcagatcaacctcggctcgccaaaacagttgcaggcggtgctc
tttgacgagcttcagatgccgaagaccaaacgcaccaagaccggctacaccaccgacgcg
gatgccctgcagtcgctgttcgacaagaccggccacccgttcctgcagcatctgctggcc
caccgggacgccacccggctcaaggtcaccgtcgacgggctgctcaactcggtggcctcc
gacgggcgcatccacaccaccttcaaccaaaccatcgcggcgacgggccgattgtcgtcg
accgagccgaacctgcagaacattccgatccgcaccgaggcgggccggcggatccgcgac
gcgttcgtggtcggcgacggttatgccgagctgatgaccgccgactacagccagatcgag
atgcggatcatggcccacctgtcccaggacgccgggctgatcgaagccttcaacacgggg
gaggacctgcactcgttcgtggcctcccgcgccttcggggtgcccatcgaggaggtcacc
ggcgagctgcgccgccgggtcaaggccatgtcctacgggctggcctacgggctgagcgcc
tacgggctgtcgcaacagctcaagatctccaccgaggaggccaaggagcagatggacgcc
tacttcgcccggttcggcggggtgcgcgactacctgcacgccgtcgtcgaacaggcccgc
aaggacggctacacctcgacggtgctgggccgccgccggtacctgcccgagctcgacagc
agcaaccggcaggtgcgcgaagccgccgagcgggcggcgctgaatgcgcccatccagggc
agcgccgccgacatcatcaaggtggccatgatcgaggtcgacaaggcgatcaaggaggcg
ggcctgcggtcgcggatcctgttgcaggtgcacgacgagctgctcttcgaggtcgcggcc
ggcgagcgggagcagctggaggcgctggcccgcgacaagatgggcggcgcctacccgctc
gacgtcccgctggaggtgtccgtgggctacggccgcagctgggacgctgcggcgcattga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (22)   

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