KEGG   Mycobacterium avium subsp. paratuberculosis K-10: MAP_1328c
Entry
MAP_1328c         CDS       T00156                                 
Name
(GenBank) hypothetical protein
  KO
K10563  formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
mpa  Mycobacterium avium subsp. paratuberculosis K-10
Pathway
mpa03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:mpa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    MAP_1328c
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mpa03400]
    MAP_1328c
Enzymes [BR:mpa01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     MAP_1328c
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     MAP_1328c
DNA repair and recombination proteins [BR:mpa03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     MAP_1328c
SSDB
Motif
Pfam: Fapy_DNA_glyco H2TH zf-FPG_IleRS NFACT_N Zn_Tnp_IS1595 zf-TFIIB zinc-ribbons_6 Zn-ribbon_8
Other DBs
NCBI-ProteinID: AAS03645
UniProt: Q740M2
Position
complement(1420827..1421615)
AA seq 262 aa
MPELPDVEGFRRQLADALPGRRVRRVKVHDPGILRNTTATTLARRLTGRRFAGPRRHGKW
LVLPTDGPTLLIHSGMTGRPYYCADGAAEDRHQRLVVSLDQGELRYTDLRKLRGVWLADD
PDDLVPITGRQGPDALGLGLRDFRDALTARSARRRQLKSALMDQSVLAGLGNLLVDEICW
RARIRPTRAVADLDDDEVKALHRAMTQVLRTAVRHGRVPGLPRWLTGARDAPDPHCPRCG
GRLDHARVGGRTTLWCPRCQPG
NT seq 789 nt   +upstreamnt  +downstreamnt
atgccggaactgcccgacgtggagggattccggcggcaactggccgacgcgttgccgggg
cgacgcgtccggcgggtgaaggtgcacgatcccgggatcctgcgcaacaccaccgcgacg
acgctggcccgccggctgaccgggcggcggttcgccggcccgcgacgacacggcaagtgg
ctggtgcttcccaccgacggcccgacgctgctgatccacagcggaatgaccggccgcccc
tactattgcgccgacggtgccgccgaggaccgccaccagcgcctcgtggtgtcgctggac
cagggcgaactgcgctacaccgatcttcgtaaattgcggggagtctggctggccgacgat
cccgacgatctggtgcccatcaccggccggcaaggccccgacgcgctgggtcttggcctg
cgcgatttccgcgacgcgctgacggcgcgctcggcccggaggcggcagctcaaatccgcg
ctgatggaccagtcggtgctcgccgggctgggcaacctgctggtcgacgagatctgctgg
cgggcccggatccgccccacccgcgcggtcgcggacctggacgacgacgaggtgaaggcg
ctgcaccgggcgatgacgcaggtgctgcgcaccgcggtgcggcatggccgggtgccgggc
ttgccgcgctggctcaccggcgcccgcgacgcgcccgacccgcactgcccccgctgcggc
ggccgcctggaccacgcccgggtgggcggccggaccaccctgtggtgcccgcgctgtcag
cccgggtaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (19)   

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