KEGG   Mus pahari (shrew mouse): 110313920
Entry
110313920         CDS       T05929                                 
Name
(RefSeq) nuclear RNA export factor 2-like
  KO
K14284  nuclear RNA export factor
Organism
mpah  Mus pahari (shrew mouse)
Pathway
mpah03008  Ribosome biogenesis in eukaryotes
mpah03013  Nucleocytoplasmic transport
mpah03015  mRNA surveillance pathway
mpah05014  Amyotrophic lateral sclerosis
mpah05164  Influenza A
mpah05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:mpah00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    110313920
   03015 mRNA surveillance pathway
    110313920
   03008 Ribosome biogenesis in eukaryotes
    110313920
 09160 Human Diseases
  09172 Infectious disease: viral
   05164 Influenza A
    110313920
   05168 Herpes simplex virus 1 infection
    110313920
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    110313920
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mpah03019]
    110313920
   03009 Ribosome biogenesis [BR:mpah03009]
    110313920
Messenger RNA biogenesis [BR:mpah03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     110313920
   mRNA cycle factors
    Stress granule specific factors
     110313920
Ribosome biogenesis [BR:mpah03009]
 Eukaryotic type
  Pre-60S particles
   Export and cytoplasmic maturation factors
    110313920
SSDB
Motif
Pfam: Tap-RNA_bind TAP_C NTF2 LRR_8 LRR_4 RGS-like
Other DBs
NCBI-GeneID: 110313920
NCBI-ProteinID: XP_021044047
Ensembl: MGP_PahariEiJ_G0031944
Position
X:complement(114604385..114623028)
AA seq 621 aa
MSSNEKKQGPFRCTGTTNAWQSPMGRKKDKVSSLSCAGKRTDHSEHTGHTILPLKARSDG
GNLEIRAVLWNPSVRHAPYAGQPRSREEEHMEDQIHVTVLRDDKPEQREAGQSTEDGALG
SWFKVTVPCGRKYDKTQLMNSIQSLCSVPFTPVDFHFDKHRIQFFVPDPSIASALKDVSY
KIYNEDFHKIPIFVNPSVAPYSVQNRFTKEEMEQLKLTMRKRYDVFQHALCLKKLRFDPD
LMKHNIDMILNRRSCMAATLQIIQEDFPRLLSLNLSSNKLFQLDSLFDVVKKAPHLKILN
LSKNMLKTVWELEKMKGLKLQQLWLEGNPLCSTFQDRSSYVSAVLECFPELSYLDGRKLL
LPTVMNNEERQLMKPCKDIFKGSEVIKNQVQKFLREYYLMYDSEERQGLLNIYHDQACFS
LTIPFNPSDPDLNSMCEYFKDENDMKSFKEFRIQRQLLKYTKQDIVECLRGFPQTLHAFS
SFQVNICFQMETMLCFSVCGLFKEEGTSKECVRAFMRIFIAVLGRSSNMCIVNDQLFVRN
PSSEEIHSAFVIPSPTSYSNFKLVLSQEQQRMVQAFSTQSGMKLEWSQKCLEDNKWDYTR
AAKVFTMLQTKCKIPKEFFKQ
NT seq 1866 nt   +upstreamnt  +downstreamnt
atgagctctaatgaaaagaagcaggggcccttcagatgcacaggaacaactaatgcctgg
caaagtcccatgggaagaaagaaagacaaggtttcttccctgagctgtgctggcaagagg
accgatcattctgagcatactgggcacacgattctgcctttaaaagcccggagtgatggt
ggaaatctggagataagagctgttctctggaacccatcagtaagacatgcaccttatgct
gggcaacctaggagtagggaggaagagcatatggaggaccaaatccatgtcacagtgttg
agagatgacaaacctgaacagagagaagcagggcagtccaccgaagatggagcactgggg
agctggttcaaggtcacggttccatgtgggaggaagtatgacaagacgcagctaatgaat
tcaatccagagcctttgcagcgtgcccttcacacccgtggatttccatttcgacaaacac
cggatccagttctttgtcccggaccctagcattgcctctgccttgaaggatgtcagctat
aagatatataacgaggactttcataagatacctatttttgtcaatccctcggttgcaccc
tactctgtgcagaataggttcacaaaagaagaaatggagcagctgaagctgaccatgagg
aaaagatacgatgttttccagcatgctctctgcctcaaaaagctccgctttgatccagac
ttgatgaaacacaacatagacatgatcctgaaccgccgaagctgcatggctgccaccctt
cagatcatccaagaggattttcctaggctgttgtccttgaacttgagcagcaacaaactg
ttccaattagatagcctgtttgatgtggtaaagaaggcaccacacctcaagatcctgaac
ctctccaaaaacatgctgaaaacagtatgggagttggagaagatgaaagggctgaagctg
caacagctgtggctagaagggaacccgttgtgcagcaccttccaagacagatcttcctat
gtaagtgcagtcctggaatgttttccggaattgtcatacctggatggcaggaagttatta
ctaccaactgtaatgaacaatgaagaacgccagttaatgaagccctgcaaggacatcttt
aagggttcagaggtgataaagaatcaagtacagaaattcctgcgagagtattacttgatg
tacgactctgaagagcgacagggtctcctgaacatttaccatgaccaggcctgcttctcc
ctgaccattcccttcaaccccagtgatccagatctgaatagcatgtgtgagtacttcaag
gatgaaaatgatatgaagagtttcaaggagttccgcattcagaggcagctactgaagtac
acaaaacaggacattgtggagtgtctgaggggatttccccaaactctacatgccttcagc
tctttccaagtgaacatctgtttccagatggaaacgatgctctgcttctctgtttgtggg
ttgttcaaggaagagggtacctccaaggaatgtgttcgtgccttcatgaggatcttcatt
gctgtccttggcaggagttcaaacatgtgtattgtgaatgaccagctttttgtgaggaat
ccaagctctgaagagatccatagtgcctttgtcataccctcacccacatcatactccaac
ttcaagcttgtcctttctcaagagcagcaaagaatggtgcaggctttctccacccagtcg
gggatgaaacttgaatggtctcagaagtgccttgaggacaataagtgggactataccaga
gctgctaaagtcttcactatgctccagaccaagtgcaagatcccaaaggaattcttcaaa
caatga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (6)   
   KEGG PATHWAY (6)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (22)   

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