KEGG   Mus pahari (shrew mouse): 110317246
Entry
110317246         CDS       T05929                                 
Symbol
Lsm3
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm3
  KO
K12622  U6 snRNA-associated Sm-like protein LSm3
Organism
mpah  Mus pahari (shrew mouse)
Pathway
mpah03018  RNA degradation
mpah03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mpah00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110317246 (Lsm3)
  09123 Folding, sorting and degradation
   03018 RNA degradation
    110317246 (Lsm3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mpah03019]
    110317246 (Lsm3)
   03041 Spliceosome [BR:mpah03041]
    110317246 (Lsm3)
Messenger RNA biogenesis [BR:mpah03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     110317246 (Lsm3)
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     110317246 (Lsm3)
Spliceosome [BR:mpah03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    110317246 (Lsm3)
 Complex C
  U2 snRNP components
    110317246 (Lsm3)
SSDB
Motif
Pfam: LSM TIG_SUH vATP-synt_E DUF150_C
Other DBs
NCBI-GeneID: 110317246
NCBI-ProteinID: XP_021047337
Ensembl: MGP_PahariEiJ_G0022402
Position
2:108438025..108444339
AA seq 102 aa
MADDVDQQQTTNTVEEPLDLIRLSLDERIYVKMRNDRELRGRLHAYDQHLNMILGDVEET
VTTIEIDEETYEEIYKSTKRNIPMLFVRGDGVVLVAPPLRVG
NT seq 309 nt   +upstreamnt  +downstreamnt
atggcggacgacgtcgatcagcaacagaccaccaataccgtagaggagcccctggacctg
atcaggctcagcctggatgagcgaatttatgtgaaaatgagaaatgaccgagagcttcga
ggcagactacatgcttatgatcaacatttaaatatgatcctgggagatgtagaagaaact
gtgacgacgatagagattgatgaggagacatatgaagagatatataaatccacaaaacga
aacatccctatgctcttcgttcggggagatggtgtcgttctcgtcgcccctccgttgaga
gttggctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (16)   

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