KEGG   Mus pahari (shrew mouse): 110318637
Entry
110318637         CDS       T05929                                 
Symbol
Tsc1
Name
(RefSeq) hamartin isoform X1
  KO
K07206  tuberous sclerosis 1
Organism
mpah  Mus pahari (shrew mouse)
Pathway
mpah04072  Phospholipase D signaling pathway
mpah04140  Autophagy - animal
mpah04150  mTOR signaling pathway
mpah04151  PI3K-Akt signaling pathway
mpah04152  AMPK signaling pathway
mpah04211  Longevity regulating pathway
mpah04218  Cellular senescence
mpah04714  Thermogenesis
mpah04910  Insulin signaling pathway
mpah05163  Human cytomegalovirus infection
mpah05165  Human papillomavirus infection
mpah05168  Herpes simplex virus 1 infection
mpah05231  Choline metabolism in cancer
Brite
KEGG Orthology (KO) [BR:mpah00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04072 Phospholipase D signaling pathway
    110318637 (Tsc1)
   04151 PI3K-Akt signaling pathway
    110318637 (Tsc1)
   04152 AMPK signaling pathway
    110318637 (Tsc1)
   04150 mTOR signaling pathway
    110318637 (Tsc1)
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    110318637 (Tsc1)
  09143 Cell growth and death
   04218 Cellular senescence
    110318637 (Tsc1)
 09150 Organismal Systems
  09152 Endocrine system
   04910 Insulin signaling pathway
    110318637 (Tsc1)
  09149 Aging
   04211 Longevity regulating pathway
    110318637 (Tsc1)
  09159 Environmental adaptation
   04714 Thermogenesis
    110318637 (Tsc1)
 09160 Human Diseases
  09161 Cancer: overview
   05231 Choline metabolism in cancer
    110318637 (Tsc1)
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    110318637 (Tsc1)
   05163 Human cytomegalovirus infection
    110318637 (Tsc1)
   05165 Human papillomavirus infection
    110318637 (Tsc1)
SSDB
Motif
Pfam: Hamartin
Other DBs
NCBI-GeneID: 110318637
NCBI-ProteinID: XP_021049480
Ensembl: MGP_PahariEiJ_G0024813
Position
3:15930431..15980718
AA seq 1161 aa
MAQLANIGELLSMLDSSTLGVRDDVTTIFKESLNSERGPMLVNTLVDYYLETNSQPVLHI
LTTLQEPHDKHLLDKINEYVGKAATRLPVLSLLGHVVRLQPSWKHKLSQAPLLPSLLKCL
KMDTDVVVLTTGVLVLITMLPMIPQSGKQHLLDFFDIFGRLSSWCLKKPGHVTEVYLVHL
HASVYALFHRLYGMYPCNFVSFLRSHYSMKENVETFEEVVKPMMEHVRIHPELVTGSKDH
ELDPRRWKTLETHDVVIECAKVSLDPTEASYEDGYSVSHQLSACFPHRSADVTTSPYVDT
QNSYGGSTSTPSSNSRLMLFSPPGQLPQGLSSTSTRLLPEPLQASLWSPSAVCGMTTPPT
SPGNVPADLSHPYSKAFGTTAGGKGTPSGTPATSPPPAPPCPQDDCVHGPAAQASATAPR
KEERTDSSRPYLHRQSNDRGLEDPPGSKGSVPLRNLPEFLGDLASEEDSIEKDKEEAAIS
KELSEITTAEADPGVPRGGFDSPFYRDSLSGSQRKTQSAASGTQGSSVNPEPLHSSLDKH
GPDTPKQAFTPIDPPSGSAHASPAGDRDRQTSLETSILTPSPCKIPPQRGVSFGSGQLTP
YDHLFEVALPKTACHFVSKKTEELLKKVKGNPEEDCVPSTSPMEVLDRLIEQGAGAHSKE
LSRLSLPSKSVDWTHFGGSPPSDEIRTLRDQLLLLHNQLLYERFKRQQHALRNRRLLRKV
IRAAALEEHNAAMKDQLKLQEKDIQMWKVSLQKEQARYSQLQEQRDTTVTQLHSQIRQLQ
HDREEFYNQSQELQTKLEDCRNMIAELRVELKKANNKVCHTELLLSQVSQKLSNSESVQQ
QMEFLNRQLLVLGEVNELYLEQLQSKHPDTTKEVEMMKTAYRKELEKNRSHLLQQNQRLD
ASQRRVLELESLLSKKDHLLLEQKKYLEDVKSQASGQLLAAESRYEAQRKITRVLELEIL
DLYGRLEKDGRLRKLEEDRAEAAEAAEERLDCCSDGCADSLVGHNEEASGHNGETRTSRP
GGTRASCGGRVTGGSSSSSSELSTPEKPPSQRFSSRWEPATGEPSSSIPATVGSLPSSKS
FLGMKARELFRNKSESQCDEDDVTMSSSSLSETLKTEPGKDSGTENKTPLSLDAPHPSSP
NSDSVGQLHIMDYNETHPEHS
NT seq 3486 nt   +upstreamnt  +downstreamnt
atggcccagttagccaacattggggagctgctctccatgctggactcttccacactgggt
gtgcgggatgacgtgacgaccatcttcaaggagtccctcaattctgaacgtgggcctatg
cttgtcaacacgttggtggattattacctggaaaccaattctcagccggtattgcacatc
ctgaccaccttgcaggagccacatgataagcacctcttggacaaaattaatgagtatgta
ggcaaagctgctacccgtttacccgtcctctcgctgctggggcatgttgtgagattacag
ccatcttggaagcataagctctctcaagcacctcttctgccttctttattgaaatgtctc
aagatggacacggatgttgtggtcctcacaactggtgtcttggtgttgatcaccatgctc
cccatgatcccgcagtcaggaaagcagcaccttctcgacttctttgacatctttggccgt
ctctcgtcatggtgcctgaagaaaccaggccatgtgacagaagtgtacctggtccatctt
catgccagcgtttatgccctctttcaccgcctttatgggatgtacccttgtaacttcgtc
tccttcctgcgctctcactacagtatgaaggaaaatgtggagacttttgaagaagtggtc
aagccaatgatggagcatgtgcgaattcacccggaattagtgactggatccaaggaccat
gaactggaccctcgaaggtggaagacattagaaactcatgatgttgtaatagagtgtgcc
aaagtctctctggaccctacagaagcctcgtatgaagatgggtattctgtgtctcaccag
ctctctgcctgcttccctcaccgttcagctgatgtcaccaccagcccttatgtggacaca
cagaacagctatgggggttccacttccaccccttcctccaactctcggctaatgttgttc
agtccacctgggcagctacctcagggtttgagttccacatcgacacggctgttacctgag
ccgctgcaagctagtctctggagcccatctgcggtctgtggtatgaccactcctcctacg
tctcctggaaatgtcccagctgatttgtcacatccgtacagtaaagcctttggtaccact
gcaggtggaaaaggaactccttcaggaaccccagcgacctctcctcctccagccccgcct
tgtccccaagatgactgtgtgcatggtccagcagcccaggcctcagccacagcccccagg
aaggaagaaagaacagattcctcaaggccttaccttcacagacagtcaaacgaccgagga
ttagaggatccacctggaagcaaaggttctgttcctctgaggaatctacctgagttccta
ggtgatctggcttctgaggaagacagtatagagaaagataaggaagaagctgcaatatct
aaagagctttctgagatcactactgcagaggcggatcctggagttcctcgagggggcttt
gactctcccttctaccgagacagtctctctggttctcagcggaagactcagtcagcagcc
tctgggactcagggctccagcgtgaaccctgagcctttgcactcctctctggacaaacat
gggcccgacacaccaaagcaagcctttactcccatagacccaccctctggcagtgctcat
gccagtcctgctggggacagggatcgccagacttctctggagaccagtatcctcactccc
agcccttgcaaaattccacctcagaggggagtgagctttggaagtgggcagcttacccca
tatgatcatctctttgaggtggccttgccaaagactgcctgtcactttgtcagcaagaag
actgaggaactgttgaagaaagtgaagggaaaccctgaggaagactgtgtgccctctacc
tccccaatggaagtactggacagactgatagagcagggagcaggtgcacacagcaaggag
ctgagcaggttgtccttgcccagcaagtctgttgactggacccactttggaggctctcct
ccctcagatgagatccggaccctccgagaccagttgcttttactgcacaatcagctgctg
tatgagcgcttcaagcggcagcagcatgcactcaggaacagaaggctcctgcgcaaggtg
atccgagcggcagctctggaggaacataatgcagcaatgaaagatcagttgaagttacaa
gagaaggacatccagatgtggaaggtgagtctgcagaaagaacaagcccgatacagtcag
cttcaagaacaacgtgacaccacggtgacccaactgcatagccagatcagacagctacag
catgaccgagaagaattctacaaccagagtcaggagttacagacaaagctggaggactgc
agaaacatgattgcggagcttcgggtggagctgaagaaggctaacaacaaggtgtgccat
actgagctgctgctcagccaggtctctcagaagctctccaacagtgagtcagtgcagcag
cagatggagttcttgaataggcagctcctggtgctcggggaggtcaatgagctgtacctg
gagcagctgcagagcaagcatcctgacaccaccaaggaagtagaaatgatgaaaactgcg
tatcggaaagaactggagaaaaacagaagccaccttctccagcagaaccagaggttggat
gcctcacagaggcgagttttggaactggaatctcttctgtccaagaaagaccaccttctc
ctagaacagaagaaatatcttgaggatgtcaagagccaggcgagtggacagctgctggct
gcagagagcaggtatgaggctcagagaaagatcaccagggtgttggaactggagatccta
gacttgtatggcaggttggaaaaagatggccgcctacggaaactagaagaggacagagca
gaggcagcagaggcagcagaagagaggcttgactgttgtagtgatggatgtgcagattcc
ttggtaggacataatgaagaggcctctggtcacaacggtgagaccaggacctccagacct
ggtggcacccgggccagctgtggaggtagagtcactggaggcagcagcagcagcagcagt
gaactttccactccagagaaaccccccagccagaggttcagcagccgctgggaacctgcc
acgggcgagccctccagcagcatccccgccactgtgggctcacttcccagttccaaaagc
ttcctgggcatgaaggcccgggagctgttccgtaataagagtgagagccagtgtgatgag
gatgacgtgaccatgagtagcagcagcctttctgagaccttgaagacagaaccgggcaag
gactcaggcacggaaaacaagactcccctgagtctagacgccccacacccatcttcccca
aactcagacagtgtgggacagctccacatcatggactacaatgagactcatcccgagcac
agttga

  All links  
Ontology (1)   
   KEGG BRITE (1)   
Pathway (13)   
   KEGG PATHWAY (13)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
Protein sequence (4)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (1)   
   Pfam (1)   
All databases (28)   

Download RDF
DBGET integrated database retrieval system