KEGG   Mus pahari (shrew mouse): 110319803
Entry
110319803         CDS       T05929                                 
Symbol
Smc4
Name
(RefSeq) structural maintenance of chromosomes protein 4 isoform X1
  KO
K06675  structural maintenance of chromosome 4
Organism
mpah  Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:mpah00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:mpah03036]
    110319803 (Smc4)
Chromosome and associated proteins [BR:mpah03036]
 Eukaryotic type
  Chromosome condensation proteins
   Condensin I
    110319803 (Smc4)
   Condensin II
    110319803 (Smc4)
SSDB
Motif
Pfam: SMC_N SMC_hinge AAA_21 AAA_23 AAA_29 ATG17_like DUF192 ABC_tran
Other DBs
NCBI-GeneID: 110319803
NCBI-ProteinID: XP_021051047
Ensembl: MGP_PahariEiJ_G0026506
Position
4:61091081..61121285
AA seq 1286 aa
MRRKGTKPSTACHQEEGSPPSPDGAHGEGEMEQPADGAESAASAEPPGEELDNRSLEEIL
NSIPPPPPPAMASEAGAPRLMITHIVNQNFKSYAGEKILGPFHKRFSCIIGPNGSGKSNV
IDSMLFVFGYRAQKIRSKKLSVLIHNSDEHKDIQSCTVEVHFQKIIDKEGDDYEVLPNSN
FCVSRTAYRDNTSVYHISGKKKTFKDVGNLLRSHGIDLDHNRFLILQGEVEQIAMMKPKG
QTEHDEGMLEYLEDIIGCGRLNEPIKVLCRRVEILNEHRGEKLNRVKMVEKEKDALEGEK
NIAIEFLTLENEMFKKKNHICQYYIYDLQNRIAEMKTQKEKIHEDTKEITEKSNVLSNEM
KAKNSAVKDVEKKLNKVTKFIEQNKEKFTQLDLEDVQVREKLKHATSKAKKLEKQLQKDK
EKVEELKSIPAKSKDVINETTTRNSSLEKEREKEEKKLKEVMDSLKQETRGLQKEKEIQE
KELMGFNKSVNEARSKMEVAQSELDIYLSRHNTAVSQLSKAKEALITASETLKERKAAIK
DINTKLPQTQQELKEKEKELQKLTQEEINLKSLIHDLFQKVEEAKSSLAMNRSRGKVLDA
IIQEKKSGRIPGIYGRLGDLGAIDEKYDIAISSCCHALDYIVVDSIDTAQECVNFLKKHN
IGIATFIGLDKMAVWAKKMSKIQTPENTPRLFDLVKVKNEEIRQAFYFALRDTLVANNLD
QATRVAYQKDRRWRVVTLQGQIIEQSGTMSGGGSKVMRGRMGSSVIDEVSVEEVNKMESQ
LERHSKQAMQLQEHKVQHEEAVVRLQQSERDMRNTLEKFTASIQGLSEQEEYLCVQIKEL
EANVLTTAPDKKQQKLLEENVSVFKKEYDAVAEKAGKVEAEIKRLHDTIIDINNRKLKAQ
QNKLDTINKQLDECASAITKAQVAIKTADRNLKKAQDSVCGTEKEIKDTEKEINDLKTEL
KNIEDNAEEVIKNTKAAEKSLPEIQKEHRNLLQELKVIQENEHALQKDALSIKLKLEQID
GHISEHNSKIKYWQKEISKIKLHPVEDNPVETVAVLSQEDLEAIKNPDSITNQIALLEAQ
CREMKPNLGAIAEYKKKEDLYLQRVAELDKITSERDNFRQAYEDLRKQRLNEFMAGFYVI
TNKLKENYQMLTLGGDAELELVDSLDPFSEGIMFSVRPPKKSWKKIFNLSGGEKTLSSLA
LVFALHHYKPTPLYFMDEIDAALDFKNVSIVAFYIYEQTKNAQFIIISLRNNMFEISDRL
IGIYKTYNITKSVAVNPKQIASKGLC
NT seq 3861 nt   +upstreamnt  +downstreamnt
atgcggcgtaagggcaccaagccctccactgcctgccaccaggaggaagggtcgccgccc
tccccggacggtgcccacggcgaaggagagatggagcaaccggccgacggagcggagagc
gctgcatccgcagagcctccaggtgaggagctggataacagaagtttagaggagattttg
aatagtatccctccacccccacctccagccatggccagtgaagctggagctcctcgtctc
atgataactcatattgtaaaccaaaacttcaagtcctatgctggagagaaaatcctggga
cctttccataagcgcttttcctgtattattggaccaaatggcagtggaaagtccaatgtt
attgattccatgctttttgtgtttggctatcgagcccaaaaaataaggtctaaaaagcta
tcggtactgatacataattctgatgaacacaaggatattcagagttgtactgtagaagtt
cattttcaaaagataattgataaggaaggagatgattatgaagtccttcctaacagcaac
ttctgtgtatctagaactgcctacagagataatacttctgtctatcatataagtggaaag
aagaagacatttaaagatgttggaaatcttcttagaagccatgggattgacttagaccat
aatcgatttttaatcttgcagggtgaagttgaacagattgctatgatgaaacccaagggc
cagactgaacatgatgaaggtatgcttgagtatttagaagatataattggctgtggacgg
ctaaatgaacctattaaagtcttgtgtcggagagttgaaatattaaatgaacacagagga
gaaaagttaaacagagtgaaaatggtagaaaaggagaaggatgcactagagggagagaaa
aacatagccattgagttccttaccctggaaaacgaaatgtttaagaaaaagaatcacatc
tgtcaatactacatttatgacctgcagaatagaattgctgaaatgaagactcaaaaggaa
aaaattcatgaagatactaaagaaattactgagaagagcaatgtgctttccaatgaaatg
aaagcaaagaattcagctgtaaaggatgtagaaaagaagctcaataaagttacaaaattt
atcgaacagaataaagaaaaatttacacaactagatttggaagatgttcaagttagggaa
aaattaaaacatgctacaagtaaagccaaaaaactggagaaacaacttcaaaaagataaa
gaaaaggttgaagagctgaaaagtatacctgccaagagtaaagatgtcataaatgagaca
acaactagaaacagttctcttgagaaagaaagagagaaagaagaaaaaaaattaaaagag
gtcatggacagccttaaacaggaaacacgggggcttcagaaagaaaaggagattcaagaa
aaggaacttatgggttttaacaaatcagtaaatgaagcacgttcaaagatggaagttgct
cagtcagaacttgatatctatctcagtcgacataatacggcagtgtctcaattaagtaag
gcgaaggaagctttgattacagcttctgagactctcaaggaaaggaaagctgcaatcaag
gatataaacacaaagctccctcagactcaacaagaattaaaggagaaagaaaaagaactt
cagaaactgacacaagaagaaataaacttaaaaagtttgattcatgatcttttccaaaaa
gttgaagaagcaaagagttccttagcaatgaatcgaagtagggggaaagtacttgatgca
ataattcaagaaaaaaaatcaggcaggatcccaggaatatatggaagattgggagactta
ggagctattgatgaaaaatatgacattgctatatcatcctgttgccatgcattggactac
attgttgttgattctatagatacagcccaagaatgtgtaaacttccttaaaaagcataat
attggaattgcaactttcataggtttggataaaatggcagtgtgggccaaaaaaatgagc
aaaattcaaactcctgaaaatactcctcggttatttgatctagttaaagtaaaaaatgag
gaaatccgccaagctttttactttgctttacgagataccttggtggctaacaatttggat
caagctacaagagtagcatatcaaaaagacagacgctggagagtagtaactctgcaggga
cagatcatagaacagtcaggtacaatgagtggtggtggaagcaaggtgatgagaggaaga
atgggctcttcggttatcgatgaagtctctgtagaagaggtaaataagatggaatcccag
ttggaaaggcattccaaacaagcaatgcaactccaagaacacaaagtacagcatgaagaa
gcagtagttaggttacagcagagtgaacgagacatgagaaatacactagaaaagttcact
gcaagcatccagggtttatcagaacaagaagagtatttgtgtgtacaaattaaagaactg
gaagctaacgttcttactacagcccctgataaaaaacagcagaaattgctcgaagaaaat
gtcagtgttttcaaaaaagaatatgatgctgtggctgagaaagctggtaaagttgaagct
gagattaaacggctacacgataccatcatagatatcaacaaccgaaaactcaaggcccaa
caaaacaaacttgacacgataaataagcagctcgatgaatgtgcttctgctattactaaa
gcccaagtagcaatcaagactgctgacagaaatcttaaaaaggcacaggattctgtttgc
ggcacagagaaagaaataaaagacactgaaaaagaaataaatgacttaaaaacagaacta
aaaaatattgaagacaatgcagaagaggtcataaaaaatacaaaagctgcagagaagtcc
ttaccagaaatccagaaagaacatcgtaatctacttcaagaactaaaagttattcaagaa
aatgaacatgctcttcagaaagatgcacttagtattaagttgaaacttgagcagatagat
ggccacatttctgaacataactcaaaaataaaatactggcaaaaagagatttcaaaaata
aaattgcatcctgttgaagataatcctgttgagacagtagcagttctaagccaggaggat
cttgaggcaatcaagaatccagattctataacaaatcaaattgcacttttggaagctcaa
tgtcgtgaaatgaaaccaaaccttggagccatcgctgagtataaaaaaaaggaagattta
tatttgcaaagagtagccgaactggacaaaattacttctgaaagagataattttagacaa
gcatatgaagatcttcgaaaacaaaggctgaatgaatttatggctggtttttatgtaata
acaaataaactaaaagaaaactaccagatgctcacattgggaggagatgctgaactggag
cttgtggatagtttagatcctttttctgaaggaatcatgttcagtgttcggccacctaag
aaaagttggaagaagatctttaacctctcaggaggcgagaaaacccttagttccttggcc
ttagtgtttgctcttcatcactacaagcccactcccctctacttcatggatgagattgat
gcagctctggattttaaaaatgtgtctattgttgcattttatatatacgagcaaacaaaa
aatgcccagttcataataatctctcttcgaaataatatgtttgagatttcagatagactt
attggcatctataaaacatataatattacaaaaagtgttgcagtgaacccaaaacaaatt
gcatctaaaggactctgttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (8)   
   Pfam (8)   
All databases (19)   

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