KEGG   Mus pahari (shrew mouse): 110322777
Entry
110322777         CDS       T05929                                 
Symbol
Ube4b
Name
(RefSeq) ubiquitin conjugation factor E4 B isoform X1
  KO
K10597  ubiquitin conjugation factor E4 B [EC:2.3.2.27]
Organism
mpah  Mus pahari (shrew mouse)
Pathway
mpah04120  Ubiquitin mediated proteolysis
mpah04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:mpah00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    110322777 (Ube4b)
   04120 Ubiquitin mediated proteolysis
    110322777 (Ube4b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:mpah04121]
    110322777 (Ube4b)
Enzymes [BR:mpah01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     110322777 (Ube4b)
Ubiquitin system [BR:mpah04121]
 Ubiquitin ligases (E3)
  U-box type E3
   110322777 (Ube4b)
SSDB
Motif
Pfam: Ufd2P_core U-box
Other DBs
NCBI-GeneID: 110322777
NCBI-ProteinID: XP_021055184
Ensembl: MGP_PahariEiJ_G0029162
Position
6:complement(100290533..100382171)
AA seq 1307 aa
MEELSADEIRRRRLARLAGGQTSQPTTPLTSPQRENPPGPPIAASAPGPSQSLGLNVHNM
TPATSPIGAAGVAHRSQSSEGVSSLSSSPSNSLETQSQSLSRSQSMDIDGVSCEKSMSQV
DVDSGIENMEVDENDRREKRSLSDKEPSSGPEVSEEQALQLVCKIFRVSWKDRDRDVIFL
SSLSAQFKQNPKEVFSDFKDLIGQILMEVLMMSTQTRDENPFASLTATSQPIATAARSPD
RTLMLNTGSSSGTSPMFCNMGSFSTSSLSSLYETSPAPSASLWSFVPVLSPSFASPSHPA
PQAAVPSPPLSPHSTASGIAAGSQPSSQRYRPYTVTHLWGSSPCPTPRSSILANSPGFPA
HASSPRAVPASSSRQRPRSRVPAFPPASPSAASRRPSSLRISPSLGASGGASNWDSYSDH
FTIETCKETDMLNYLIECFDRVGIEEKKAPKMCSQPAVSQLLSNIRSQCISHTALVLQGS
LTQPRSLQQPSFLVPYMLCRNLPYGFIQELVRTTHQDEEVFKQIFIPILQGLALAAKECS
LDSDYFKYPLMALGELCETKFGKTHPMCNLVASLPLWLPKSLSPGSGRELQRLSYLGAFF
SFSVFAEDDAKVVEKYFSGPAITLENTRVVSQSLQHYLELGRQELFKILHSILLNGETRE
AALSYMAALVNANMKKAQMQADDRLVSTDGFMLNLLWVLQQLSTKIKLETVDPTYIFHPR
CRITLPNDETRINATMEDVNEWLTELYGDQPPFSEPKFPTECFFLTLHAHHLSILPSCRR
YIRRLRAIRELNRTVEDLKNNESQWKDSPLATRHREMLKRCKTQLKKLVRCKACADAGLL
DESFLRRCLNFYGLLIQLMLRILDPAYPDVTLPLNSEVPKVFAALPEFYVEDVAEFLFFI
VQYSPQVLYEPCTQDIVMFLVVMLCNQNYIRNPYLVAKLVEVMFMTNPSVQPRTQKFFEM
IENHPLSTKLLVPSLMKFYTDVEHTGATSEFYDKFTIRYHISTIFKSLWQNIAHHGTFME
EFNSGKQFVRYINMLINDTTFLLDESLESLKRIHEVQEEMKNKEQWDQLPRDQQQARQSQ
LAQDERVSRSYLALATETVDMFHLLTKQVQKPFLRPELGPRLAAMLNFNLQQLCGPKCRD
LKVENPEKYGFEPKKLLDQLTDIYLQLDCARFAKAIADDQRSYSKELFEEVISKMRKAGI
KSTIAIEKFKLLAEKVEEIVAKNARAEIDYSDAPDEFRDPLMDTLMTDPVRLPSGTIMDR
SIILRHLLNSPTDPFNRQMLTESMLEPVPELKEQIQAWMREKQSSDH
NT seq 3924 nt   +upstreamnt  +downstreamnt
atggaggagctgagcgctgacgagattcgacggaggcgcctggcacgacttgctggtgga
cagacctcccagccgaccaccccgcttacatctccccagagggagaaccctccaggacct
ccaatagctgcatcagccccaggcccctcccagagtcttggtctcaatgtccacaacatg
accccagctacctcccccataggtgcagcaggagttgcccatcggagccagagcagcgaa
ggcgtcagttctcttagcagctcaccttccaacagccttgagacacagtctcagtccctc
tcccgttcccagagcatggatatcgatggcgtctcctgtgagaaaagcatgtcccaggtg
gatgtggattcgggaattgagaatatggaggtggacgagaacgaccgaagagaaaaacgg
agcctgagtgacaaggagccttcttcaggtcctgaggtgtctgaagagcaggccttacag
ctggtctgtaagatcttccgtgtctcctggaaggaccgcgacagagatgtcatcttcctt
tcttctctctctgcgcagtttaaacagaacccaaaagaagtgttctctgattttaaggat
ctgattggccagattttaatggaagtactgatgatgtccactcagacacgagatgaaaat
ccatttgccagtctgacagccacatcccagcccatcgccacggcagctcggtcaccagac
cgcactctcatgctgaacactggctccagttcaggaacgagccccatgttctgcaacatg
ggctccttcagcaccagctcgttgtctagcctctatgaaacgagccctgccccctctgcc
agtttatggagttttgtgccagtgctcagcccatcctttgcctcaccttcccacccagcc
ccgcaggcggctgtgccttccccacccctcagccctcacagcacagcttccggaattgct
gctggaagccagccctcatcccagaggtatcgaccctacactgtcacgcacctgtggggg
tcttcaccttgtcccaccccacgatcctccattctggctaactccccaggcttccctgcc
catgcaagtagtccccgggcagtacctgccagctcctccagacagaggccccgcagcagg
gtccccgccttcccacctgcctcgcccagtgccgccagcagacgtccctcctccctgcgg
atctctcctagtttgggagcctctggtggagcaagcaactgggattcatacagtgaccat
ttcaccattgaaacctgcaaagagacggacatgctgaactacctcatcgagtgctttgac
cgagttggaatagaggaaaaaaaagcaccaaagatgtgcagccagcccgcagtcagccag
ctcctgagtaacatccgctcgcagtgcatctcccacacggcgctggtgctgcaaggttcc
ctcacacagcccaggtccttgcaacagccatccttcctcgtgccgtacatgctctgcagg
aatctcccgtacggcttcattcaagagctggtgaggaccactcaccaggatgaagaggtg
ttcaagcagatctttatccccattttacaaggcctggcgcttgctgccaaagagtgctcc
ttggatagcgactactttaagtaccccctcatggcgctgggtgaactctgtgaaaccaag
tttgggaagacacaccctatgtgcaatttggtcgcctctttacccctgtggctgccgaag
tccttaagccctggttctgggcgggagctgcagagactctcctacttaggggccttcttt
agcttctcagtcttcgcagaggacgacgcaaaggtggttgagaaatacttctcagggccc
gccattaccctggagaacacacgcgtggtcagccagtcactacagcattatctggagcta
ggacggcaagaacttttcaagattctacatagtattttgttaaatggcgaaactcgtgaa
gcagctctcagctacatggcggcccttgtcaatgccaacatgaagaaagcccagatgcag
gcagatgatcggttggtgtctacagacgggtttatgctgaatctcctttgggttctgcaa
caactaagtacaaaaatcaagttagaaacagttgaccccacttacatattccacccgaga
tgtcgtatcactctcccgaatgatgagacacggataaatgcaacgatggaggatgtgaat
gagtggctgacagaactctatggtgatcagcctccattttctgagccaaaattccctacg
gaatgtttctttcttaccctgcacgctcaccacctctctattctgcctagttgtcgtcgc
tatattcgccgactccgagccatccgcgaactcaatagaaccgtggaagatttgaaaaat
aatgaaagccagtggaaagattccccactggccaccagacaccgcgaaatgctgaagcgt
tgtaaaactcagcttaagaaactggtacggtgcaaggcctgtgctgacgctggcttactt
gatgagagcttcctaagaagatgtctgaatttttatggccttctcattcagctgatgctg
cgcatcctggaccctgcgtatcctgacgtaacactgcctttgaattcagaagtccccaag
gtatttgcagcattgcctgagttttatgtagaagatgttgctgaatttttattttttatt
gtacaatattctcctcaggtgctttatgagccctgtactcaggacattgtcatgttcctc
gttgtgatgctgtgcaaccagaactacatccgaaacccttacctagtggccaaactggtg
gaggtcatgtttatgaccaacccctctgtccagccgagaactcagaagttttttgagatg
attgagaaccatcctctctctaccaaattgctggtaccttccctcatgaagttctataca
gatgtcgagcatactggagccaccagcgagttctatgacaagttcacaattcgctatcac
attagcaccatttttaaaagcctttggcaaaatatagctcaccatggcaccttcatggag
gagttcaattcgggaaagcagttcgttcggtatatcaatatgctgataaatgacacaacc
tttttattggatgaaagcctggagtctctgaagcggatccatgaagtgcaagaagagatg
aagaacaaagaacagtgggaccagctgcctcgggatcagcagcaggcccggcagtctcag
cttgctcaggacgagcgtgtttcccgttcttaccttgccctggcaactgaaaccgtggat
atgttccatctcctcaccaagcaagtccagaagccgttcctgaggccagagcttggtccc
cgattagcagccatgctgaactttaacctgcagcagctctgcggacccaagtgccgggac
ctgaaagttgaaaacccagagaagtatggttttgagccaaagaagctgttggaccaactg
acggatatttatttacagctggactgtgctcgctttgctaaagccatcgccgatgaccag
cgatcctacagcaaggaactgtttgaagaagtcatttcaaagatgcggaaggcaggaatc
aaatccaccatcgcaatagagaagtttaagcttcttgcagagaaagtggaggaaattgtg
gcaaagaatgcgcgggcagaaatagactacagcgatgccccggacgagttcagagaccct
ctgatggacaccctgatgactgatcccgtgagactgccctctggtaccatcatggaccgt
tctatcatcctgcggcatctgctcaactcccccaccgaccccttcaaccgccagatgctg
actgagagcatgctggaaccagtgccagagctaaaggagcagattcaggcctggatgaga
gagaagcagagcagtgaccactaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (2)   
   Pfam (2)   
All databases (17)   

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