KEGG   Mus pahari (shrew mouse): 110322864
Entry
110322864         CDS       T05929                                 
Symbol
Hdac1
Name
(RefSeq) histone deacetylase 1
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
mpah  Mus pahari (shrew mouse)
Pathway
mpah03082  ATP-dependent chromatin remodeling
mpah03083  Polycomb repressive complex
mpah04110  Cell cycle
mpah04213  Longevity regulating pathway - multiple species
mpah04330  Notch signaling pathway
mpah04350  TGF-beta signaling pathway
mpah04613  Neutrophil extracellular trap formation
mpah04919  Thyroid hormone signaling pathway
mpah05016  Huntington disease
mpah05031  Amphetamine addiction
mpah05034  Alcoholism
mpah05165  Human papillomavirus infection
mpah05169  Epstein-Barr virus infection
mpah05200  Pathways in cancer
mpah05202  Transcriptional misregulation in cancer
mpah05203  Viral carcinogenesis
mpah05206  MicroRNAs in cancer
mpah05220  Chronic myeloid leukemia
Brite
KEGG Orthology (KO) [BR:mpah00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    110322864 (Hdac1)
   03083 Polycomb repressive complex
    110322864 (Hdac1)
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    110322864 (Hdac1)
   04350 TGF-beta signaling pathway
    110322864 (Hdac1)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    110322864 (Hdac1)
 09150 Organismal Systems
  09151 Immune system
   04613 Neutrophil extracellular trap formation
    110322864 (Hdac1)
  09152 Endocrine system
   04919 Thyroid hormone signaling pathway
    110322864 (Hdac1)
  09149 Aging
   04213 Longevity regulating pathway - multiple species
    110322864 (Hdac1)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    110322864 (Hdac1)
   05202 Transcriptional misregulation in cancer
    110322864 (Hdac1)
   05206 MicroRNAs in cancer
    110322864 (Hdac1)
   05203 Viral carcinogenesis
    110322864 (Hdac1)
  09162 Cancer: specific types
   05220 Chronic myeloid leukemia
    110322864 (Hdac1)
  09172 Infectious disease: viral
   05169 Epstein-Barr virus infection
    110322864 (Hdac1)
   05165 Human papillomavirus infection
    110322864 (Hdac1)
  09164 Neurodegenerative disease
   05016 Huntington disease
    110322864 (Hdac1)
  09165 Substance dependence
   05031 Amphetamine addiction
    110322864 (Hdac1)
   05034 Alcoholism
    110322864 (Hdac1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:mpah03036]
    110322864 (Hdac1)
Enzymes [BR:mpah01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     110322864 (Hdac1)
Chromosome and associated proteins [BR:mpah03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     110322864 (Hdac1)
   HDAC complexes
    Sin3A-HDAC complex
     110322864 (Hdac1)
    BRAF-HDAC complex
     110322864 (Hdac1)
    REST complex
     110322864 (Hdac1)
    SHIP complex
     110322864 (Hdac1)
    MiDAC complex
     110322864 (Hdac1)
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     110322864 (Hdac1)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    110322864 (Hdac1)
  Chromatin remodeling factors
   NuRD complex
    110322864 (Hdac1)
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 110322864
NCBI-ProteinID: XP_021055390
Ensembl: MGP_PahariEiJ_G0028855
Position
6:complement(80572323..80594723)
AA seq 482 aa
MAQTQGTKRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKAN
AEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAS
AVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHG
DGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAI
FKPVMSKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGG
GGYTIRNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLE
KIKQRLFENLRMLPHAPGVQMQAIPEDAIPEESGDEDEEDPDKRISICSSDKRIACEEEF
SDSDEEGEGGRKNSSNFKKAKRVKTEDEKEKDPEEKKEVTEEEKTKEEKPEAKGVKEEVK
LA
NT seq 1449 nt   +upstreamnt  +downstreamnt
atggcgcagactcagggcaccaagaggaaagtctgttactactacgacggggatgttgga
aactactattatggacaagggcacccgatgaagcctcaccgaatccgtatgactcacaat
ctgctgctcaactatggtctctatcgaaagatggaaatctatcgtcctcacaaagccaat
gctgaggagatgaccaagtaccacagcgatgactacattaaattcttgcgttctattcgc
ccagataatatgtctgaatacagcaagcagatgcagagattcaacgttggtgaggactgt
ccggtatttgatggcttgtttgagttctgccagttgtccacgggtggctctgtcgcaagt
gctgtgaagctcaataagcagcagacggacatcgctgtgaactgggctgggggcctgcac
cacgcaaagaagtctgaagcgtctggcttctgttacgtcaatgatatcgtcttggccatc
ctggaactgctaaagtatcaccagagggtgctgtatattgacattgatattcaccatggc
gatggcgtggaagaggccttctatactacagaccgggtcatgactgtgtcctttcataaa
tacggagagtacttcccaggaactggggacctacgggatattggggctggcaaaggcaag
tactacgctgtgaactacccactgcgagacggcattgatgacgagtcctatgaagccatc
ttcaagccagtcatgtccaaagtaatggagatgttccagcctagtgcagtggtcttacag
tgtggctcagattccctgtctggggatcggttaggttgcttcaatctgaccatcaaagga
cacgccaagtgtgtggagttcgtgaagagtttcaacttgcccatgctgatgctaggaggg
ggtggctacaccatccggaatgtcgctcggtgctggacttacgaaacagcggtggccctg
gacacagagatccctaatgagctgccgtacaatgactactttgaatactttggaccagat
ttcaagcttcacatcagcccttccaatatgactaaccagaacaccaatgaatacctggaa
aagatcaagcagcgtctctttgagaatttgagaatgctgccccatgcccctggggttcag
atgcaggccatacctgaggatgccatcccagaagagagtggtgatgaggatgaggaagac
cctgacaaacgcatctccatctgctcctcagacaaacgcatcgcctgtgaggaagagttc
tcagactcagatgaggagggagaaggtggtcgcaagaactcttctaacttcaaaaaagcc
aaaagagttaaaacagaggatgagaaagagaaagatcctgaagagaagaaagaagtcaca
gaagaggagaaaaccaaggaggagaagccagaagccaaaggggtcaaagaagaggtcaag
ttggcctga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (18)   
   KEGG PATHWAY (18)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (30)   

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