KEGG   Mus pahari (shrew mouse): 110323225
Entry
110323225         CDS       T05929                                 
Name
(RefSeq) ubiquitin-like isoform X1
  KO
K02927  ubiquitin-large subunit ribosomal protein L40e
Organism
mpah  Mus pahari (shrew mouse)
Pathway
mpah03010  Ribosome
mpah04120  Ubiquitin mediated proteolysis
mpah04137  Mitophagy - animal
mpah04140  Autophagy - animal
mpah05012  Parkinson disease
mpah05022  Pathways of neurodegeneration - multiple diseases
mpah05167  Kaposi sarcoma-associated herpesvirus infection
mpah05171  Coronavirus disease - COVID-19
Brite
KEGG Orthology (KO) [BR:mpah00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    110323225
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    110323225
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    110323225
   04137 Mitophagy - animal
    110323225
 09160 Human Diseases
  09172 Infectious disease: viral
   05171 Coronavirus disease - COVID-19
    110323225
   05167 Kaposi sarcoma-associated herpesvirus infection
    110323225
  09164 Neurodegenerative disease
   05012 Parkinson disease
    110323225
   05022 Pathways of neurodegeneration - multiple diseases
    110323225
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:mpah03011]
    110323225
   04121 Ubiquitin system [BR:mpah04121]
    110323225
Ribosome [BR:mpah03011]
 Ribosomal proteins
  Eukaryotes
   Large subunit
    110323225
  Archaea
    110323225
Ubiquitin system [BR:mpah04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   110323225
SSDB
Motif
Pfam: ubiquitin Ribosomal_L40e Rad60-SLD Ubiquitin_2 TBK1_ULD Rad60-SLD_2 OTU1_UBXL Ubiquitin_5 DUF2604
Other DBs
NCBI-GeneID: 110323225
NCBI-ProteinID: XP_021056038
Position
6:complement(80898290..80898699)
AA seq 126 aa
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQVEDGHTLSDYN
IQKESTLHLVLRLRGGIIEPSLRQLAQKYNCDKIFCRKCYARLRPRAVNCRKKCGHTNNL
RPKKVK
NT seq 381 nt   +upstreamnt  +downstreamnt
atgcagatcttcgtgaagaccctgacgggcaagaccatcactcttgaggtcgagcccagt
gacaccatcgagaatgtcaaggccaagatccaagacaaggaaggcatcccacctgaccag
cagaggctgatatttgccggcaaacaggtggaggatggccacaccctctcggactacaac
atccagaaagagtccaccttgcacctggtgctgcgtctgcgcggtggcatcattgagcca
tcccttcgtcagcttgcccagaagtacaactgtgacaagatattctgccgcaagtgctac
gcacgcctgcgccctcgtgcagtcaactgccgcaagaagtgcggccataccaacaacctg
cgccccaagaaggtcaaataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (8)   
   KEGG PATHWAY (8)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (9)   
   Pfam (9)   
All databases (26)   

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