KEGG   Mus pahari (shrew mouse): 110327645
Entry
110327645         CDS       T05929                                 
Symbol
Nfrkb
Name
(RefSeq) nuclear factor related to kappa-B-binding protein isoform X1
  KO
K11671  nuclear factor related to kappa-B-binding protein
Organism
mpah  Mus pahari (shrew mouse)
Pathway
mpah03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:mpah00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    110327645 (Nfrkb)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:mpah03036]
    110327645 (Nfrkb)
Chromosome and associated proteins [BR:mpah03036]
 Eukaryotic type
  Chromatin remodeling factors
   INO80 complex
    110327645 (Nfrkb)
SSDB
Motif
Pfam: NFRKB_winged
Other DBs
NCBI-GeneID: 110327645
NCBI-ProteinID: XP_021062415
Ensembl: MGP_PahariEiJ_G0014804
Position
10:26347582..26380771
AA seq 1309 aa
MDSLDHMLTDPLELGPCGDGHSAGIMEDCLLGGTRVSLPEDLLEDPEIFFDVVSLSTWQE
VLSDSQREHLQQFLPQFPTDSVEQQSELILALFSGENFRFGNPLHIAQKLFRDGHFNPEV
VKYRQLCFKSQYKRYLNSQQQYFHRLLKQILASRSDLLEMARRRGPALPFPHKHHSPSRS
PEEREWRTQQRYLKVLREVKEECGDTALSSDEEATLDLQENFSFEDLSSWLPSSPARSPS
PAVPLRVVPTLSTTDMKTADKIELGDSDLKLMLKKHHEKRKHQPDHPDLLTGDLTLSDIM
TRVNAGRKGSLAALYDLAVLKKKVKEKEEKKKKKIKLIKSEAEDLAEPLSNTEGVPTLSQ
APSPLAISSIKEEPLEDIKPCLGINEISSSFFSLLLEILLLESQASLPMLEDRVLDWQSS
PASSLNSWFSAAPNWAELVLPALQYLAGESRAVPSSFSPFVEFKEKTQQWKLLGQSQDNE
KELAALFHLWLETKDQAFCKQENEDSSDAMTPVPRVRTDYVVRPSTGEEKRVFQEQERYR
YSQPHKAFTFRMHGFESVVGPVKGVFDKETSLNKAREHSLLRSDRPAYVTILSLVRDAAA
RLPNGEGTRAEICELLKDSQFLAPDVTSTQVNTVVSGALDRLHYEKDPCVKYDIGRKLWI
YLHRDRSEEEFERIHQAQAAAAKARKALQQKPKPPSKVKSSNKEGSTKGLSGPSEQSQMS
LSDCSMPPTPVTPVTPTTPALPTPISPPPVSAGNRSGSTTVSEPAKSSSGVVLVSSPTMP
QLGTMLSPAAIQTPPSSQATARLVSQSSSAGLPQVRVVAQPSLPAVSQQSVGPAQPLSQM
PAGPQIRVPVTATQTKVVPQAVMATVPVKGQTAAASVQRPGPGQTGLTVTNLPAAVSPVN
KTAMSSPGNSAPSASTTAVIQNVTGQNIIKQVSITGQLGVKPQTGNSIPLTATNFRIQGK
DVLRLPPSSITTDAKGQTVLRITPDMMATLAKSQVTTVKLTQDLFGAGSGTAGKGISATL
HVTSNPVHAADSPAKAPSASVPSSAPAGTTVVKVTPDLKPAETSNSAFRLMPALGVSVAD
QKGKNTVASSEAKPAATIRIVQGLGVMPPKAGQTITVAAHAKQGASVAGGSGTVHSSTVS
LPSINAAVSKTVAVASGATSTPISIGTGAPTVRQVPVNTTVVSTSQSGKLPTRITVPLSV
ISQPMKGKSVVTAPIIKGNLGANLSGLGRNIILTTMPAGTKLIAGNKPVSFLTAQQLQQL
QQQGQATQVRIQTVPASHLQQGTASGSSKAVSTVVVTTAPSPKQAPEQQ
NT seq 3930 nt   +upstreamnt  +downstreamnt
atggattccttggaccacatgctgacagatcccctagaacttggtccttgtggagatggt
cacagtgcagggatcatggaggactgccttctgggtggtaccagggttagtctgcctgaa
gaccttctggaggatcccgagatattctttgatgtcgtcagcctctccacatggcaggaa
gtactaagtgactctcagcgtgaacacctccagcagtttctgcctcagttccctacggac
agtgtggagcagcagagtgaactcatccttgccctgttcagtggggagaacttccgattc
ggaaaccctctgcacatcgcccagaagctcttccgagatggacactttaaccctgaggtg
gtcaagtatcgtcagctctgcttcaagtcacagtacaagcggtatctcaactcccagcag
cagtatttccaccggctgctgaaacagatccttgcttccaggagtgatctcttggagatg
gctcgtaggcgtggccctgctcttccctttccacacaagcaccattcaccgtcccgaagc
cccgaggagcgggagtggcggacccagcagcggtacttgaaagtcttgagggaagtgaag
gaggaatgtggtgacactgctctgtcctctgatgaggaggccacgttggatttacaagaa
aacttttcttttgaagatctcagctcatggcttccaagctctccagcacgttctcctagt
cctgcggtgcccctgagggtggtgcccacgctttccaccacggatatgaaaactgcagac
aaaatagaactgggggacagtgacctgaagttaatgttaaagaagcaccatgagaagcgg
aaacatcaaccagatcacccagaccttttgacaggggacctgaccctcagtgacatcatg
actcgagtaaatgctggcaggaagggctccctagcagccttgtatgatttggctgttctt
aaaaaaaaggtgaaggaaaaggaagagaagaaaaagaagaaaataaagttgattaagtcg
gaggcagaggatctggctgagcccctaagcaatactgaaggggtcccaactctctctcag
gccccctctcccctggcaatatcatctatcaaggaagaacccctggaagacatcaagcct
tgccttggaatcaatgaaatatcttccagttttttctctcttctgttagagatcctgctg
ctggaaagtcaggctagccttcctatgctggaggatcgagttttggactggcagtcttcg
ccagccagctccctcaacagctggttctctgctgcccccaactgggctgagttggtgttg
cctgccctgcagtatcttgctggagaaagccgagcggttccttccagtttctctccattt
gttgaattcaaagagaaaacccagcagtggaaattgcttggtcaatctcaagataacgaa
aaggaattagctgctctcttccacctgtggctagaaaccaaagaccaggccttctgtaag
caggaaaatgaagacagctcagatgccatgacacctgtccctcgagtaagaactgactat
gtggttcgacctagcacaggagaggagaaacgggtttttcaagagcaggagcgttacagg
tatagccaaccccataaggcattcacctttcgcatgcatggctttgagtctgtggtgggg
ccagtgaagggcgtgtttgacaaggagacctccctcaacaaggctcgtgagcattcactg
ctgcgctctgaccggcctgcctatgtcaccattctgtctcttgttcgggatgctgcagct
cggctgcctaatggagaaggcactcgggcagagatctgtgaactgctcaaggactctcag
tttcttgctccagatgtcaccagcactcaggtgaacacagtggtgagtggcgcactggat
cgattgcattatgagaaagacccttgtgtgaaatatgacatcggtcggaagctgtggatc
tacctgcatcgtgaccggagtgaggaagagtttgaacggattcatcaagctcaagcagca
gcagctaaagccagaaaagctcttcaacaaaaacccaagccgccatccaaggtgaagtcc
agtaataaggagggctccacgaagggccttagcggtccttctgagcagagccagatgagc
ctcagtgactgcagcatgccgcccaccccagttacgcctgtaacccccaccacgccagca
ttgcccacccccatctctcctccacctgtgtcagcggggaacagaagtggctctaccact
gtctctgagccagccaagtctagttcaggtgttgttcttgtgtcctcaccaacaatgcca
cagctaggaacgatgctttccccagctgccatccagactccacccagttctcaggccact
gcccggcttgtcagccagtccagctcagcaggactcccccaggttcgggtggtagcccag
cccagccttcctgctgtttcccagcagtcggtagggccagcacagccgctatcccagatg
ccagcaggaccacagattcgtgtaccagtcactgctacccaaaccaaagtagtgccccag
gcagttatggcaacagttccagtcaaggggcaaactgcagcggcctcggtgcaacggcct
ggacctgggcagacagggctcacagtgacaaatcttccggctgcagtcagccctgtgaac
aagacagccatgagttctcctgggaactctgctccaagtgcctccaccacagccgtcatt
cagaatgtcacaggacagaacatcatcaagcaggtgtcgatcactggacagcttggtgtg
aagcctcagacagggaacagcattccactcacagccacaaacttccgaatccagggtaag
gatgtactgcggctgccgccttcttccatcaccacagatgccaaggggcagacggttttg
agaatcactccagacatgatggccacattggccaagtctcaggttaccacagttaaactg
actcaggacctctttggggcaggaagtggcactgcaggcaaaggcatctctgctaccttg
catgttacttccaaccccgtccacgcagctgacagccctgccaaggccccttcagccagt
gttccttcatcagctccagcaggtactactgtggtcaaagtaactcctgatctcaagcca
gcagaaacttcaaattcagcttttcgcttgatgccagctcttggtgtaagtgtggcagat
cagaagggaaagaacacagtggcctcttcagaagcaaaacctgccgccacgatccgcatt
gtgcaggggctgggagtgatgccgcctaaagcgggccagaccatcactgttgcagcacat
gcaaagcaaggagcctctgttgctggaggatctggaactgtccattcttcaacggtgtcc
ttacccagtataaatgccgctgtgtcgaagactgtggctgtggcttctggggcaacaagc
acccccatcagcatcgggactggagcccccactgtgcgacaggttcctgttaacactaca
gttgtgtccacatcccagtctgggaagctgcctaccagaatcacagttcctctctctgtg
attagccagccaatgaagggcaagagtgtggtcacagcccccatcatcaaaggcaacctt
ggagccaatctcagcggactgggtcgcaacattatcctcacaaccatgccagcaggtact
aagctcattgctggcaataagccagtgagtttcctcactgctcagcagttgcagcagctt
cagcagcagggtcaggccacgcaggtgcgcatccagaccgtcccagcatcccatctgcaa
cagggcacggcttctggctcctccaaagcagtgtccaccgttgttgtgaccacagctcca
tctcctaaacaagcacctgagcaacagtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
Protein sequence (8)   
   RefSeq(pep) (8)   
DNA sequence (8)   
   RefSeq(nuc) (8)   
Protein domain (1)   
   Pfam (1)   
All databases (25)   

Download RDF
DBGET integrated database retrieval system