KEGG   Mus pahari (shrew mouse): 110330612
Entry
110330612         CDS       T05929                                 
Symbol
Gabrb1
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta-1 isoform X1
  KO
K05181  gamma-aminobutyric acid receptor subunit beta
Organism
mpah  Mus pahari (shrew mouse)
Pathway
mpah04080  Neuroactive ligand-receptor interaction
mpah04723  Retrograde endocannabinoid signaling
mpah04726  Serotonergic synapse
mpah04727  GABAergic synapse
mpah05032  Morphine addiction
mpah05033  Nicotine addiction
Brite
KEGG Orthology (KO) [BR:mpah00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04080 Neuroactive ligand-receptor interaction
    110330612 (Gabrb1)
 09150 Organismal Systems
  09156 Nervous system
   04727 GABAergic synapse
    110330612 (Gabrb1)
   04726 Serotonergic synapse
    110330612 (Gabrb1)
   04723 Retrograde endocannabinoid signaling
    110330612 (Gabrb1)
 09160 Human Diseases
  09165 Substance dependence
   05032 Morphine addiction
    110330612 (Gabrb1)
   05033 Nicotine addiction
    110330612 (Gabrb1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:mpah04040]
    110330612 (Gabrb1)
Ion channels [BR:mpah04040]
 Ligand-gated channels
  GABA-A
   110330612 (Gabrb1)
SSDB
Motif
Pfam: Neur_chan_memb Neur_chan_LBD OAD_gamma
Other DBs
NCBI-GeneID: 110330612
NCBI-ProteinID: XP_021066510
Ensembl: MGP_PahariEiJ_G0017061
Position
13:62101307..62542753
AA seq 474 aa
MWTVQNRESLGLLSFPVMVAMVCCAHSSNEPSNMSYVKETVDRLLKGYDIRLRPDFGGPP
VDVGMRIDVASIDMVSEVNMDYTLTMYFQQSWKDKRLSYSGIPLNLTLDNRVADQLWVPD
TYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIE
SYGYTTDDIEFYWNGGEGAVTGVNKIELPQFSIVDYKMVSKKVEFTTGAYPRLSLSFRLK
RNIGYFILQTYMPSTLITILSWVSFWINYDASAARVALGITTVLTMTTISTHLRETLPKI
PYVKAIDIYLMGCFVFVFLALLEYAFVNYIFFGKGPQKKGASKQDQSANEKNRLEMNKVQ
VDAHGNILLSTLEIRNETSGSEVLTGVSDPKATMYSYDSASIQYRKPLSSREGFGRGLDR
HGVPGKGRIRRRASQLKVKIPDLTDVNSIDKWSRMFFPITFSLFNVVYWLYYVH
NT seq 1425 nt   +upstreamnt  +downstreamnt
atgtggacagtacaaaatcgagagagtttggggcttctctcttttcctgtgatggttgcc
atggtttgttgtgcacacagctccaatgaacccagcaacatgtcatacgtgaaagagacc
gtggaccgactgctcaaaggatatgacattcgcttgcggccggactttggagggcccccg
gtggacgtcgggatgcggatcgatgtcgccagcatagacatggtctcggaagtgaatatg
gattatacactcaccatgtatttccagcagtcttggaaggacaagaggctttcatattct
ggaatcccattaaatctgacccttgacaacagagtagctgaccaactctgggtaccagac
acctactttctcaatgacaagaaatcatttgtgcatggggtcacagtgaaaaaccgaatg
atcaggctgcatcctgatggaactgttctctatggactacggatcacaaccactgcagca
tgtatgatggatcttcgaagatatcctctagatgagcaaaactgcaccctggagattgaa
agttatggctataccactgatgacatcgaattttactggaatggaggagagggagccgta
actggggtcaataaaattgagcttccccaattttcaattgttgactacaagatggtgtcc
aagaaggtggagttcacaacaggggcatatccacgactatcactaagttttcgtctaaag
agaaacattggttacttcattttgcagacctacatgccttccacactgattacaattctg
tcctgggtgtcgttttggatcaactatgatgcatctgcagctagagtcgccctaggaatc
accacggtgctgaccatgaccaccatcagcacacacctcagggagaccctgccgaagatc
ccttatgtcaaagcgattgacatctatctcatgggatgttttgtgtttgtgttcctggct
ctcctggaatacgcttttgtaaactacattttctttggaaaaggccctcaaaaaaaggga
gcgagcaaacaggaccagagtgccaatgaaaagaacagactggagatgaacaaagtccag
gttgatgcccacggcaatattctcctcagcaccctggaaatcaggaacgagaccagtggc
tccgaggtgctcacaggtgtaagtgaccccaaggccaccatgtactcatacgacagcgcc
agcatccagtaccgcaagccgctgagcagccgcgagggcttcgggcgtgggctggacagg
cacggggtgcccggcaaggggcgcatccgcaggcgagcctcgcagctcaaagtgaagatc
cccgacttgactgacgtaaactccatagacaagtggtcccgaatgttcttccccatcacc
ttttctctttttaatgtcgtttattggctttactatgtacactaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (6)   
   KEGG PATHWAY (6)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (3)   
   Pfam (3)   
All databases (22)   

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