KEGG   Mus pahari (shrew mouse): 110333599
Entry
110333599         CDS       T05929                                 
Name
(RefSeq) core histone macro-H2A.1 isoform X1
  KO
K11251  histone H2A
Organism
mpah  Mus pahari (shrew mouse)
Pathway
mpah03082  ATP-dependent chromatin remodeling
mpah04217  Necroptosis
mpah04613  Neutrophil extracellular trap formation
mpah05034  Alcoholism
mpah05322  Systemic lupus erythematosus
Brite
KEGG Orthology (KO) [BR:mpah00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    110333599
 09140 Cellular Processes
  09143 Cell growth and death
   04217 Necroptosis
    110333599
 09150 Organismal Systems
  09151 Immune system
   04613 Neutrophil extracellular trap formation
    110333599
 09160 Human Diseases
  09163 Immune disease
   05322 Systemic lupus erythematosus
    110333599
  09165 Substance dependence
   05034 Alcoholism
    110333599
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:mpah03036]
    110333599
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:mpah04147]
    110333599
Chromosome and associated proteins [BR:mpah03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histones
    110333599
Exosome [BR:mpah04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   110333599
SSDB
Motif
Pfam: Macro Histone_H2A_C Histone CBFD_NFYB_HMF DUF1764 Clp_N
Other DBs
NCBI-GeneID: 110333599
NCBI-ProteinID: XP_021070866
Ensembl: MGP_PahariEiJ_G0019644
Position
16:complement(58814009..58878815)
AA seq 372 aa
MSSRGGKKKSTKTSRSAKAGVIFPVGRMLRYIKKGHPKYRIGVGAPVYMAAVLEYLTAEI
LELAGNAARDNKKGRVTPRHILLAVANDEELNQLLKGVTIASGGVLPNIHPELLAKKRGS
KGKLEAIITPPPAKKAKSPSQKKPVAKKTGGKKGARKSKKKQGEVSKAASADSTTEGTPT
DGFTVLSTKSLFLGQKLNLIHSEISNLAGFEVEAIINPTNADIDLKDDLGNTLEKKGGKE
FVEAVLELRKKNGPLEVAGAAVSAGHGLPAKFVIHCNSPVWGADKCEELLEKTVKNCLAL
ADDRKLKSIAFPSIGSGRNGFPKQTAAQLILKAISSYFVSTMSSSIKTVYFVLFDSESIG
IYVQEMAKLDAN
NT seq 1119 nt   +upstreamnt  +downstreamnt
atgtcgagccgcggcgggaagaagaaatccaccaagacctcccggtcagccaaggccggc
gtcatcttccccgtgggacgcatgctgcggtacatcaagaaaggccaccctaagtatagg
atcggagtgggggcacctgtctacatggctgctgtcctggagtacctgacggctgagatc
ctggagttggctggcaatgcagcaagagacaacaagaagggacgggtcactccgcggcac
atcctgttagctgtggccaatgatgaagagctaaaccagctgctaaagggagtcaccata
gccagtgggggcgtgttgccgaatatccatcctgagttgctagcgaagaagcgaggatcc
aagggaaaattggaagccatcatcacgcctccgccggccaaaaaggccaagtcaccatcc
cagaagaagccagtggctaagaagacaggaggcaaaaaaggggcccggaagtctaagaag
aagcagggagaagtgagcaaggcagccagcgcagacagtacgacggagggcacgcctaca
gacggctttaccgtcctctccaccaagagtctcttcctcggccagaagctgaaccttatt
cacagtgaaatcagtaatttagccggctttgaggtggaggccataatcaatcctaccaat
gctgacattgaccttaaagatgacctaggaaacacactggagaagaagggcggcaaggag
tttgtagaagctgttctggaactccggaaaaagaatgggcccttggaggtagctggagct
gctgttagtgcaggccacggcctgcctgccaagtttgtgatccactgtaatagtcccgtc
tggggtgcagacaaatgtgaagaacttctagaaaagacggtgaaaaactgtttggctcta
gctgacgacagaaagctgaagtccattgccttcccatccattggcagcggcaggaacggg
ttcccgaagcagacggcggcccagctcattctgaaggccatctccagctactttgtgtcc
acgatgtcctcctccatcaaaactgtgtacttcgtgctttttgacagtgagagcataggt
atctatgtgcaagaaatggccaagctggacgccaactag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (5)   
   KEGG PATHWAY (5)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
Protein sequence (4)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (6)   
   Pfam (6)   
All databases (27)   

Download RDF
DBGET integrated database retrieval system