KEGG T05929: 110334527

Mus pahari (shrew mouse): 110334527

Entry

110334527         CDS       T05929

Symbol

Rangap1

Name

(RefSeq) ran GTPase-activating protein 1

K14319

Ran GTPase-activating protein 1

Organism

mpah Mus pahari (shrew mouse)

Pathway

mpah03013

Nucleocytoplasmic transport

Brite

KEGG Orthology (KO) [BR:mpah00001]
09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    110334527 (Rangap1)
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mpah03019]
    110334527 (Rangap1)
Messenger RNA biogenesis [BR:mpah03019]
Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     110334527 (Rangap1)

SSDB

Motif

Pfam:

RanGAP1_C LRR_6 LRR_8 LRR_4 Nop14 CPSF100_C BUD22 RNA_pol_Rpc4 DDHD Presenilin Mat89Bb PTPRCAP

Other DBs

NCBI-GeneID:

110334527

NCBI-ProteinID:

XP_021071925

Position

17:complement(46942107..46980374)

AA seq 938 aa
MDRRGDLLSAEGSGGGVDSASPGPPALPGRPSVATIPVPSSPRESPAWLLPTREASEPSD
GCHDRKCPPAQPTQTAPPFPAAPSPRAGPAGPGSPDSRGRRNRLGRPISRPLSPALAAAP
PPLGTADSKRIQKGDPNCQPRTTPLQWDPQNIRAHPQSSRPKGDCPTPWRKKIPRHPLGA
AVQPRFPRRQVAWPGLPAPPPRAALPGPVRAPQPRAPQPCAPPGTRWPGLCPAGLRRAKA
LTSAGLRSPRACAEPDKCCMNESANLYGRVRLLRSMFIACVLPCQRRRTGLPFPVGPASG
PGKIPLRLEQIKSKERNCRLSKILLRRHNRWGSGAGGVHELDEEPRQRRESSRLVTGPGS
HAGSQAVTDARVPSPHAAVPLVRAKEVIKEIEEFDGLEALRLEGNTVGVEAARVIAKALE
KKSELKRCHWSDMFTGRLRSEIPPALISLGEGLVTAGAQLVELDLSDNAFGPDGVRGFEA
LLKSPACFTLQELKLNNCGMGIGGGKILAAALTECHRKSSAQGKPLALKVFVAGRNRLEN
DGATALAEAFGIIGTLEEVHMPQNGINHPGVTALAQAFAINPLLRVINLNDNTFTEKGGV
AMAETLKTLRQVEVINFGDCLVRSKGAVAIADAVRGGLPKLKELNLSFCEIKRDAALVVA
EAVADKAELEKLDLNGNALGEEGCEQLQEVLDSFNMAKVLASLSDDEGEDEDEEEEEGEE
DEEEDEDEEDEEEEEEEEEDEEQEEEEEAQQRGSGEEPATPSRKILDPNSGEPAPVLSSP
TPTDLSTFLSFPSPEKLLRLGPKVSVLIVQQTDTSDPEKVVSAFLKVASVFRDEASVKTA
VLDAIDALMKKAFSSSSFNSNTFLTRLLVHMGLLKSEDKIKAIPSLHGPLMVLNHVVKQD
YFPKALAPLLLAFVTKPNGALETCSFARHNLLQTLYNI

NT seq 2817 nt +upstreamnt +downstreamnt
atggatcgcagaggggaccttctgtccgctgagggcagtggtggcggggtcgactctgct
tccccagggcccccagccctgccagggcgcccctcagtcgccacaatcccagtccccagc
agtccccgtgaatcccctgcctggctactgcccacccgggaggcctctgagcccagtgac
ggatgccacgaccggaaatgccctcctgctcagccgacccagaccgcgcccccctttcct
gccgccccctcccccagggctgggcccgcaggccccggatccccggactcgcgtggccgc
cgtaaccgactggggcgacccatcagccggccattgtccccggccctcgccgcggcccct
ccacctctaggcactgcggattcaaagcgaatacaaaagggggaccctaactgccagcct
cggaccacccccttgcagtgggatccgcaaaacatccgcgcgcacccccaaagctccaga
cccaagggagattgccccacaccatggaggaaaaaaatcccaaggcatcccctgggggct
gcagtgcagccccggtttcccaggcggcaggtggcctggcccgggcttcccgcgcctcct
ccgcgcgcggccctgcccggccctgtccgggcgccccagcctcgcgcgccccaaccttgc
gcgccgccggggacgcggtggcccggcctctgccccgcggggctccgccgcgccaaagca
ctcacctcggccgggctgcgctccccgcgggcctgcgccgagcccgataaatgttgcatg
aatgagagcgctaacctctacggaagggtgcggctacttcgcagcatgttcatcgcgtgc
gtcttgccatgccagcgccggaggacaggacttcctttcccagtaggccccgcaagcggg
cccggcaaaatcccgctccggcttgaacaaatcaaatcgaaggaaagaaactgccggctt
tcaaaaatcctcctccgccgccataatcgctggggatctggagcaggtggtgtgcacgag
ctagacgaggagccgcggcagcgaagagagtcaagcagactggtcactgggcccggctct
cacgcgggctctcaagcagtgaccgacgcgcgcgttccgtccccccacgcggcggtgccg
ctagttcgtgctaaagaagtgattaaggagatagaagagtttgacggcctcgaagctcta
cgattggagggcaacacggtgggcgtggaggcggccagagtcattgccaaggccttagag
aagaagtccgagctgaagagatgccactggagtgacatgttcaccggaaggcttcggtct
gagatcccgccggctctgatctcactaggggagggactcgtcactgcaggagcacagctg
gtggaactggacctcagtgacaacgcgtttggacccgatggagtgcgaggcttcgaggcc
ctcctcaagagcccagcctgcttcaccctacaggaactcaagcttaacaactgtggcatg
ggcatcgggggtggcaagattctggcggcagctctgactgagtgtcaccgcaagtccagt
gcccaaggcaagcccctggccctgaaggtgtttgtggccggcagaaatcgcctggagaat
gacggagccacggcactggcagaagcttttgggatcatcgggactctggaagaggtccac
atgccacagaacggaattaaccatcctggtgtcacggccctggcccaggcttttgccatc
aaccccctgttgcgagtcatcaacctaaatgacaacaccttcactgagaagggtggggtg
gctatggctgagactctgaagactctgcgacaagtggaagtgatcaattttggagactgc
ctggtgcgctctaagggtgccgttgccatcgcggatgctgtccgtgggggcctgcccaag
ctcaaggagctaaacctgtcgttctgtgaaattaagagagatgctgccctggttgttgct
gaggctgtggctgacaaggctgagctggagaagctggacctcaatggcaatgccctagga
gaagagggctgtgagcaactccaggaggtgctggacagcttcaatatggccaaggtgctg
gcatccctcagtgatgatgagggagaggatgaagatgaggaggaggaagaaggagaagag
gacgaggaggaggatgaagatgaagaggatgaggaagaagaggaggaggaggaggaggat
gaggagcaggaagaagaggaagaggcacagcagcgagggtcaggagaggagccagctaca
ccgtcaaggaagatcctggaccctaacagtggggagccagctcccgtgctgtcctccccg
actcccacagacctctccaccttcctgtcattcccctccccagagaagctgctgcgtctg
ggtcccaaggtctcggtgctgatagtccagcagactgatacctccgaccctgagaaggtg
gtttcggccttcctgaaggtggcatctgtgttcagggacgaagcctcagtaaagacagca
gtgctggatgccatagatgccctcatgaagaaggccttcagctcctcctctttcaactcc
aacaccttccttaccaggcttctcgtccacatgggtctgctcaagagtgaagacaagatc
aaggcaatccccagcctgcatggccccctgatggtgttgaaccacgtggtgaagcaggac
tatttccccaaggcccttgcacccctgctgttggcgtttgtgacaaagcccaatggtgcg
ctggaaacctgctcctttgcccgccacaatctgctgcagacgctatacaacatctag

All links

Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (12)   
   Pfam (12)   
All databases (21)   

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